RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 BAIAP2Q9UQB8 552 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 SLC27A5Q9Y2P5 690 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 MTO1Q9Y2Z2 717 aaKnown RBP8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 PTCH1Q13635 1447 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 SPATA31A3Q5VYP0 1347 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 NID2Q14112 1375 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 TP53BP1Q12888 1972 aaPredicted RBP8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 POTEMA6NI47 508 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 H7BY64 318 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 POLRMTO00411 1230 aaKnown RBP8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 SLC16A6O15403 523 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 TEX33O43247 280 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 CTAG2O75638 210 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 UBXN7O94888 489 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 CAMTA2O94983 1202 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 ZFPL1O95159 310 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 IFNA2P01563 188 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 SERPINA5P05154 406 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 PCCAP05165 728 aaPredicted RBP8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 YBX3P16989 372 aaKnown RBP eCLIP8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 PITPNBP48739 271 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 PRMT2P55345 433 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 HTRA4P83105 476 aaPredicted RBP8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 TXNL4AP83876 142 aaKnown RBP8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 SEMA3BQ13214 749 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 LRRC14Q15048 493 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 PDK4Q16654 411 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 ZNF484Q5JVG2 852 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 CCNYL2Q5T2Q4 361 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 IFIT1BQ5T764 474 aaKnown RBP8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 GPR158Q5T848 1215 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 KIAA1161Q6NSJ0 714 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 POTEGQ6S5H5 508 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 REC114Q7Z4M0 266 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 RAB44Q7Z6P3 723 aaPredicted RBP8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 TMCO2Q7Z6W1 182 aaPredicted RBP8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 ADGRD2Q7Z7M1 963 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 ZC3H7AQ8IWR0 971 aaKnown RBP8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 MAML2Q8IZL2 1156 aaPredicted RBP8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 SYT14Q8NB59 555 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 AGBL3Q8NEM8 1001 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 OR2L3Q8NG85 312 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 OR2T3Q8NH03 318 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 CREB3L4Q8TEY5 395 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 KIAA1191Q96A73 305 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 LINGO1Q96FE5 620 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 UBXN10Q96LJ8 280 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 DNAJC7Q99615 494 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 CDCA3Q99618 268 aaPredicted RBP8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 KCNS3Q9BQ31 491 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 DUSP15Q9H1R2 295 aaPredicted RBP8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 IKZF4Q9H2S9 585 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 GPN2Q9H9Y4 310 aaPredicted RBP8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 NSMCE4AQ9NXX6 385 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 PPP4R1LQ9P1A2 415 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 MLXQ9UH92 298 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 MMACHCQ9Y4U1 282 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 CYP46A1Q9Y6A2 500 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 KNDC1Q76NI1 1749 aa8.54□□□□□ -1.04
MCF2L2-203ENST00000447025 PFASO15067 1338 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 NALCNQ8IZF0 1738 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 BLACEA4D250 179 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 POM121BA6NF01 834 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 CD3EAPO15446 510 aaKnown RBP8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 CALUO43852 315 aaPredicted RBP8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 DOK2O60496 412 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 DTNBO60941 627 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 NOL4O94818 638 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 NXPH2O95156 264 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 GJB1P08034 283 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 RNH1P13489 461 aaKnown RBP8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 PSMC3P17980 439 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 FPR3P25089 353 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 FMO4P31512 558 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 CCR7P32248 378 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 SLC11A1P49279 550 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 VAMP2P63027 116 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 STRN3Q13033 797 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 TNK1Q13470 666 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 GANABQ14697 944 aaKnown RBP8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 GRM3Q14832 879 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 ECM1Q16610 540 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 RNF212Q495C1 297 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 PABPC1L2AQ5JQF8 200 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 BSPRYQ5W0U4 402 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 ETFRF1Q6IPR1 90 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 RPL13AP3Q6NVV1 102 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 UBQLNLQ8IYU4 475 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 ZNF561Q8N587 486 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 PLA2G15Q8NCC3 412 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 DEDD2Q8WXF8 326 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 NSMAFQ92636 917 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 HTRA1Q92743 480 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 THRSPQ92748 146 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 DCPSQ96C86 337 aaKnown RBP8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 BSCL2Q96G97 398 aaPredicted RBP8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 TEFMQ96QE5 360 aaKnown RBP8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 IL12RB2Q99665 862 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 MAP3K3Q99759 626 aa8.53□□□□□ -1.04
MCF2L2-203ENST00000447025 TRIM9Q9C026 710 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms