RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 IL25Q9H293 177 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 PIGMQ9H3S5 423 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 MMP25Q9NPA2 562 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 INTS10Q9NVR2 710 aaKnown RBP4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 TAS2R14Q9NYV8 317 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 ERAP1Q9NZ08 941 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 LARSQ9P2J5 1176 aaKnown RBP4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 HOOK1Q9UJC3 728 aaKnown RBP4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 TINAGQ9UJW2 476 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 ERVK-11Q9UQG0 969 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 PCDHGA5Q9Y5G8 931 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 PCDHGA1Q9Y5H4 931 aa4.36□□□□□ -1.71
HMGB1P48-201ENST00000446155 A0A0B4J293 547 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 LINC01553A4QN01 128 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 VCYO14598 125 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 SMAD9O15198 467 aaKnown RBP4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 SERPINI2O75830 405 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 BCAS2O75934 225 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 GUCA1CO95843 209 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 IGHV4-30-4P0DP06 118 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 TYMPP19971 482 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 IL10P22301 178 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 EIF2S3P41091 472 aaKnown RBP4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 CRKLP46109 303 aaKnown RBP4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 METAP2P50579 478 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 NAGLUP54802 743 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 SNU13P55769 128 aaKnown RBP4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 BRWD1-AS2P59051 145 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 SREBF2Q12772 1141 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 TRAF2Q12933 501 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 NEDD9Q14511 834 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 TAF7Q15545 349 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 PNLIPRP3Q17RR3 467 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 VWC2Q2TAL6 325 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 EIF2S3LQ2VIR3 472 aaKnown RBP4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 ATP13A5Q4VNC0 1218 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 PQLC2Q6ZP29 291 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 C15orf39Q6ZRI6 1047 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 C11orf57Q6ZUT1 292 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 RBM23Q86U06 439 aaKnown RBP4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 CNTN4Q8IWV2 1026 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 TIGD4Q8IY51 512 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 FBXO39Q8N4B4 442 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 RTL3Q8N8U3 475 aaKnown RBP4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 SLC4A11Q8NBS3 891 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 ZNF114Q8NC26 417 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 ANKRD20A12PQ8NF67 263 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 EXT2Q93063 718 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 TEKT1Q969V4 418 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 NXNL1Q96CM4 212 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 PRAM1Q96QH2 718 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 PARK7Q99497 189 aaKnown RBP4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 PCGF1Q9BSM1 259 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 INPP5KQ9BT40 448 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 PPIL3Q9H2H8 161 aaKnown RBP4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 TMEM206Q9H813 350 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 EPB41L5Q9HCM4 733 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 HINT3Q9NQE9 182 aaKnown RBP4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 IARS2Q9NSE4 1012 aaKnown RBP4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 ANO10Q9NW15 660 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 SLC9A2Q9UBY0 812 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 IL19Q9UHD0 177 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 SLC24A2Q9UI40 661 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 TSPYL4Q9UJ04 414 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 APPL1Q9UKG1 709 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 PAM16Q9Y3D7 125 aa4.35□□□□□ -1.71
HMGB1P48-201ENST00000446155 A0A1W2PPM1 405 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 FAM86B1E9PN63 330 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 MAP2K7O14733 419 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 NDC80O14777 642 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 SLC30A4O14863 429 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 HMMRO75330 724 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 GAGE7O76087 117 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 DDNO94850 711 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 GH2P01242 217 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 ICAM1P05362 532 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 VIMP08670 466 aaKnown RBP4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 ACAA1P09110 424 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 FAM86B2P0C5J1 330 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 GAGE12FP0CL80 117 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 GAGE12GP0CL81 117 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 GAGE12IP0CL82 117 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 UROSP10746 265 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 DDX5P17844 614 aaKnown RBP4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 CDC25CP30307 473 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 KCNJ4P48050 445 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 KHKP50053 298 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 TPD52P55327 224 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 SPOCK1Q08629 439 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 KIF5AQ12840 1032 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 GAGE1Q13065 139 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 GAGE4Q13068 117 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 DHX34Q14147 1143 aaKnown RBP4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 TAZQ16635 292 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 HFEQ30201 348 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 MYLK3Q32MK0 819 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 TWISTNBQ3B726 338 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 AMZ1Q400G9 498 aa4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 FAM98BQ52LJ0 330 aaKnown RBP4.34□□□□□ -1.71
HMGB1P48-201ENST00000446155 SHEQ5VZ18 495 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms