RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 ZNF615Q8N8J6 731 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 C12orf29Q8N999 325 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 AKAP1Q92667 903 aaKnown RBP eCLIP18.36■□□□□ 0.53
SHANK3-203ENST00000445220 NOCTQ9UK39 431 aaKnown RBP18.36■□□□□ 0.53
SHANK3-203ENST00000445220 NCKAP1Q9Y2A7 1128 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 TCAF1Q9Y4C2 921 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 B4GALT5O43286 388 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 STK16O75716 305 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 RSL1D1O76021 490 aaKnown RBP18.36■□□□□ 0.53
SHANK3-203ENST00000445220 GARNL3Q5VVW2 1013 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 UBE2R2Q712K3 238 aaPredicted RBP18.36■□□□□ 0.53
SHANK3-203ENST00000445220 SLC37A3Q8NCC5 494 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 EIF2B3Q9NR50 452 aaKnown RBP18.36■□□□□ 0.53
SHANK3-203ENST00000445220 POLR3BQ9NW08 1133 aaPredicted RBP18.36■□□□□ 0.53
SHANK3-203ENST00000445220 FBXO9Q9UK97 447 aaPredicted RBP18.36■□□□□ 0.53
SHANK3-203ENST00000445220 AURKAO14965 403 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 S100A2P29034 98 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 WEE1P30291 646 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 LCLAT1Q6UWP7 414 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 ELMOD2Q8IZ81 293 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 PIGKQ92643 395 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 KCTD15Q96SI1 283 aaPredicted RBP18.36■□□□□ 0.53
SHANK3-203ENST00000445220 MAU2Q9Y6X3 613 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 KANTRA0A1W2PQU2 76 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 CLDN9O95484 217 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 ARF4P18085 180 aaPredicted RBP18.36■□□□□ 0.53
SHANK3-203ENST00000445220 HJURPQ8NCD3 748 aaPredicted RBP18.36■□□□□ 0.53
SHANK3-203ENST00000445220 CEP76Q8TAP6 659 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 TMBIM1Q969X1 311 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 ATP13A3Q9H7F0 1226 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 C3orf14Q9HBI5 128 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 SGCGQ13326 291 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 ZNF267Q14586 743 aaPredicted RBP18.36■□□□□ 0.53
SHANK3-203ENST00000445220 INTS6LQ5JSJ4 861 aaKnown RBP18.36■□□□□ 0.53
SHANK3-203ENST00000445220 SNX33Q8WV41 574 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 ZNF558Q96NG5 402 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 BIRC8Q96P09 236 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 MGME1Q9BQP7 344 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 SLC30A2Q9BRI3 323 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 ZNF717Q9BY31 904 aaPredicted RBP18.36■□□□□ 0.53
SHANK3-203ENST00000445220 ST14Q9Y5Y6 855 aa18.36■□□□□ 0.53
SHANK3-203ENST00000445220 LRRC14BA6NHZ5 514 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 OR2AT4A6NND4 320 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 H0YGN5 161 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 TMEM63AO94886 807 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 ZNF182P17025 639 aaPredicted RBP18.35■□□□□ 0.53
SHANK3-203ENST00000445220 TMEM44Q2T9K0 475 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 DUSP28Q4G0W2 176 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 OTOP3Q7RTS5 596 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 ASB12Q8WXK4 309 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 NIFKQ9BYG3 293 aaKnown RBP18.35■□□□□ 0.53
SHANK3-203ENST00000445220 NFKBIZQ9BYH8 718 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 RHBGQ9H310 441 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 CCSER2Q9H7U1 834 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 NFS1Q9Y697 457 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 LDOC1O95751 146 aaPredicted RBP18.35■□□□□ 0.53
SHANK3-203ENST00000445220 POU2F1P14859 743 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 CBX5P45973 191 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 SNRPD1P62314 119 aaKnown RBP18.35■□□□□ 0.53
SHANK3-203ENST00000445220 PCDH1Q08174 1060 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 ABRQ12979 859 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 SGK2Q9HBY8 427 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 OXSMQ9NWU1 459 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 CD48P09326 243 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 ACADMP11310 421 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 SMARCB1Q12824 385 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 DOK6Q6PKX4 331 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 CRYBG2Q8N1P7 616 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 GPR20Q99678 358 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 OR2B2Q9GZK3 357 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 IKZF4Q9H2S9 585 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 AMBNQ9NP70 447 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 TMPRSS4Q9NRS4 437 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 CUEDC1Q9NWM3 386 aaPredicted RBP18.35■□□□□ 0.53
SHANK3-203ENST00000445220 AGO1Q9UL18 857 aaKnown RBP18.35■□□□□ 0.53
SHANK3-203ENST00000445220 MAGEB17A8MXT2 336 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 KPNA3O00505 521 aaPredicted RBP18.35■□□□□ 0.53
SHANK3-203ENST00000445220 KERAO60938 352 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 GADD45GO95257 159 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 TFPTP0C1Z6 253 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 GDF10P55107 478 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.35■□□□□ 0.53
SHANK3-203ENST00000445220 HID1Q8IV36 788 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 LIX1Q8N485 282 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 GPR21Q99679 349 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 ZDHHC6Q9H6R6 413 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 HPF1Q9NWY4 346 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 TBC1D14Q9P2M4 693 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 PCDHGA4Q9Y5G9 962 aa18.35■□□□□ 0.53
SHANK3-203ENST00000445220 SPIN1Q9Y657 262 aaPredicted RBP18.35■□□□□ 0.53
SHANK3-203ENST00000445220 UBR1Q8IWV7 1749 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 CHRM5P08912 532 aaPredicted RBP18.34■□□□□ 0.53
SHANK3-203ENST00000445220 STOMP27105 288 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 LINGO2Q7L985 606 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 GPALPP1Q8IXQ4 340 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 ZNF567Q8N184 647 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 LRRC58Q96CX6 371 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 C12orf66Q96MD2 445 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 CST11Q9H112 138 aa18.34■□□□□ 0.53
SHANK3-203ENST00000445220 RSPH9Q9H1X1 276 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms