RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 UBR4Q5T4S7 5183 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 CXorf51AA0A1B0GTR3 108 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 A8MX80 341 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 TGFBR3LH3BV60 316 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 INSIG1O15503 277 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 IGLV3-25P01717 112 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 RPN1P04843 607 aaKnown RBP6.85□□□□□ -1.31
SSXP3-201ENST00000442971 PREPP48147 710 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 CASP4P49662 377 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 SORDQ00796 357 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 CEBPZQ03701 1054 aaKnown RBP6.85□□□□□ -1.31
SSXP3-201ENST00000442971 ZNF33BQ06732 778 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 EIF4EBP2Q13542 120 aaPredicted RBP6.85□□□□□ -1.31
SSXP3-201ENST00000442971 MESDQ14696 234 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 GXYLT1Q4G148 440 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 TFDP3Q5H9I0 405 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 CFAP58Q5T655 872 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 CYB5R2Q6BCY4 276 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 RHBDD2Q6NTF9 364 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 ARHGAP11AQ6P4F7 1023 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 KLHL35Q6PF15 583 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 BRAT1Q6PJG6 821 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 ZNF783Q6ZMS7 281 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 DTHD1Q6ZMT9 781 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 NEK10Q6ZWH5 1172 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 BTLAQ7Z6A9 289 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 TRIM74Q86UV6 250 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 ZSWIM9Q86XI8 627 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 C1QL4Q86Z23 238 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 RBM12BQ8IXT5 1001 aaKnown RBP6.85□□□□□ -1.31
SSXP3-201ENST00000442971 SLC4A11Q8NBS3 891 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 UBA3Q8TBC4 463 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 PROKR1Q8TCW9 393 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 NCAPGQ9BPX3 1015 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 RASSF4Q9H2L5 321 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 SUV39H2Q9H5I1 410 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 SP110Q9HB58 689 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 KCTD5Q9NXV2 234 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 PSD3Q9NYI0 1048 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 MTRF1LQ9UGC7 380 aaKnown RBP6.85□□□□□ -1.31
SSXP3-201ENST00000442971 TSPAN16Q9UKR8 245 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 SIK3Q9Y2K2 1263 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 FAM215AQ9Y5M1 114 aa6.85□□□□□ -1.31
SSXP3-201ENST00000442971 ZNF407Q9C0G0 2248 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 NSG1A0A0A6YYJ2 146 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 A0A0A6YYJ9 748 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 HYKKA2RU49 373 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 SLCO1B7G3V0H7 640 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 QSOX1O00391 747 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 CASKO14936 926 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 IGSF6O95976 241 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 IGHDP01880 384 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 MSL3P1P0C860 447 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 ACPPP15309 386 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 ZNF16P17020 682 aaPredicted RBP6.84□□□□□ -1.31
SSXP3-201ENST00000442971 TFEBP19484 476 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 ZFP36P26651 326 aaKnown RBP6.84□□□□□ -1.31
SSXP3-201ENST00000442971 CCR1P32246 355 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 NSG1P42857 185 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 RGS7P49802 495 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 AP3M2P53677 418 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 GEMIN4P57678 1058 aaKnown RBP6.84□□□□□ -1.31
SSXP3-201ENST00000442971 GNA12Q03113 381 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 ALCAMQ13740 583 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 RTL6Q6ICC9 239 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 LEKR1Q6ZMV7 388 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 SHISA6Q6ZSJ9 500 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 DPPA4Q7L190 304 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 PHYKPLQ8IUZ5 450 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 CARFQ8N187 725 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 FAM216AQ8WUB2 273 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 LRRN4Q8WUT4 740 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 TNFRSF13CQ96RJ3 184 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 SIK2Q9H0K1 926 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 CHODLQ9H9P2 273 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 SLC22A11Q9NSA0 550 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 PNPLA3Q9NST1 481 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 BLOC1S4Q9NUP1 217 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 MPP6Q9NZW5 540 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 HESX1Q9UBX0 185 aa6.84□□□□□ -1.31
SSXP3-201ENST00000442971 SRPRBQ9Y5M8 271 aaKnown RBP6.84□□□□□ -1.31
SSXP3-201ENST00000442971 DNAH1Q9P2D7 4330 aa6.84□□□□□ -1.32
SSXP3-201ENST00000442971 RBMY1BA6NDE4 496 aaKnown RBP6.83□□□□□ -1.32
SSXP3-201ENST00000442971 RBMY1EA6NEQ0 496 aaKnown RBP6.83□□□□□ -1.32
SSXP3-201ENST00000442971 FAM47E-STBD1D6RA91 191 aa6.83□□□□□ -1.32
SSXP3-201ENST00000442971 MAP2K7O14733 419 aa6.83□□□□□ -1.32
SSXP3-201ENST00000442971 TFECO14948 347 aaPredicted RBP6.83□□□□□ -1.32
SSXP3-201ENST00000442971 KIAA0513O60268 411 aa6.83□□□□□ -1.32
SSXP3-201ENST00000442971 ASMTLO95671 621 aa6.83□□□□□ -1.32
SSXP3-201ENST00000442971 SERPINC1P01008 464 aa6.83□□□□□ -1.32
SSXP3-201ENST00000442971 CELA2AP08217 269 aa6.83□□□□□ -1.32
SSXP3-201ENST00000442971 RBMY1DP0C7P1 496 aaKnown RBP6.83□□□□□ -1.32
SSXP3-201ENST00000442971 SETSIPP0DME0 302 aa6.83□□□□□ -1.32
SSXP3-201ENST00000442971 BMP5P22003 454 aa6.83□□□□□ -1.32
SSXP3-201ENST00000442971 ACVR1BP36896 505 aa6.83□□□□□ -1.32
SSXP3-201ENST00000442971 RAD23BP54727 409 aa6.83□□□□□ -1.32
SSXP3-201ENST00000442971 MLF1P58340 268 aa6.83□□□□□ -1.32
SSXP3-201ENST00000442971 PITX1P78337 314 aaPredicted RBP6.83□□□□□ -1.32
SSXP3-201ENST00000442971 OR1C1Q15619 314 aa6.83□□□□□ -1.32
SSXP3-201ENST00000442971 TXNRD3NBQ6F5E7 133 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms