RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 KLHL35Q6PF15 583 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 ZNF574Q6ZN55 896 aaPredicted RBP14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 TMPRSS9Q7Z410 1059 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 B3GNT8Q7Z7M8 397 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 PLXDC1Q8IUK5 500 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 KDF1Q8NAX2 398 aaPredicted RBP14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 SPDYE1Q8NFV5 336 aaPredicted RBP14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 TFGQ92734 400 aaPredicted RBP14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 ART4Q93070 314 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 NUDT22Q9BRQ3 303 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 TBC1D10AQ9BXI6 508 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 RAB33BQ9H082 229 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 DPH5Q9H2P9 285 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 KIR3DX1Q9H7L2 352 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 MVB12BQ9H7P6 319 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 POLR1BQ9H9Y6 1135 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 LATS2Q9NRM7 1088 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 GRHL1Q9NZI5 618 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 EPHA6Q9UF33 1036 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 ZC3H7BQ9UGR2 993 aaKnown RBP14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 PCDHGA8Q9Y5G5 932 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 COMMD10Q9Y6G5 202 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 MN1Q10571 1320 aaPredicted RBP14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 IGHV5-10-1A0A0J9YXX1 117 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 CTAGE15A4D2H0 777 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 DXOO77932 396 aaKnown RBP14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 SLCO2B1O94956 709 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 C9P02748 559 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 APOA4P06727 396 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 CTAGE8P0CG41 777 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 THRAP10827 490 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 AMD1P17707 334 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 ACADLP28330 430 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 PDHA2P29803 388 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 PREPP48147 710 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 MRPS25P82663 173 aaKnown RBP14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 PDIA2Q13087 525 aaKnown RBP14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 BOP1Q14137 746 aaKnown RBP14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 GLE1Q53GS7 698 aaKnown RBP14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 HSP90AA5PQ58FG0 334 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 CTSL3PQ5NE16 218 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 UNC5AQ6ZN44 842 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 KIAA0408Q6ZU52 694 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 GALNT7Q86SF2 657 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 CTAGE6Q86UF2 777 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 IGDCC3Q8IVU1 814 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 CNTN4Q8IWV2 1026 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 CTAGE4Q8IX94 777 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 SLC22A15Q8IZD6 547 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 ACVR1CQ8NER5 493 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 SEC14L1Q92503 715 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 NCSTNQ92542 709 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 CERS2Q96G23 380 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 PWWP2AQ96N64 755 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 CMKLR1Q99788 373 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 FOXP3Q9BZS1 431 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 SEMA6CQ9H3T2 930 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 CCDC86Q9H6F5 360 aaKnown RBP14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 IL1RAPL1Q9NZN1 696 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 AKAP7Q9P0M2 348 aaPredicted RBP14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 SLC24A2Q9UI40 661 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 FBXO5Q9UKT4 447 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 CHMP2BQ9UQN3 213 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 CRYL1Q9Y2S2 319 aa14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 CFAP20Q9Y6A4 193 aaKnown RBP14.67□□□□□ -0.06
CSNK1E-210ENST00000442216 SPEGQ15772 3267 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 PRAMEF33A0A0G2JMD5 474 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 IQCF5A8MTL0 148 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 BHMG1C9JSJ3 638 aaPredicted RBP14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 TOX3O15405 576 aaPredicted RBP14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 PKMP14618 531 aaKnown RBP14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 HOXB3P14651 431 aaPredicted RBP14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 FMO4P31512 558 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 SLC1A2P43004 574 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 CAPZBP47756 277 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 LEPRP48357 1165 aaKnown RBP14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 PPM1FP49593 454 aaPredicted RBP14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 GABREP78334 506 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 HSPA14Q0VDF9 509 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 CTBP1Q13363 440 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 KRT33BQ14525 404 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 PLEKHS1Q5SXH7 462 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 RAB11FIP2Q7L804 512 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 DENND6AQ8IWF6 608 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 CEP112Q8N8E3 955 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 C2CD4AQ8NCU7 369 aaPredicted RBP14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 LKAAEAR1Q8TD35 194 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 CNTNAP3BQ96NU0 1288 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 FERD3LQ96RJ6 166 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 WDR83Q9BRX9 315 aaKnown RBP14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 LRRC1Q9BTT6 524 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 CNTNAP3Q9BZ76 1288 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 FAM129AQ9BZQ8 928 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 ZMYND15Q9H091 742 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 CCDC68Q9H2F9 335 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 TFB2MQ9H5Q4 396 aaKnown RBP14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 IARS2Q9NSE4 1012 aaKnown RBP14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 OGFRQ9NZT2 677 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 KLHL42Q9P2K6 505 aa14.66□□□□□ -0.06
CSNK1E-210ENST00000442216 POLG2Q9UHN1 485 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms