RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 NDUFS1P28331 727 aa18.43■□□□□ 0.54
HMGB3P22-201ENST00000442010 PDHA2P29803 388 aa18.43■□□□□ 0.54
HMGB3P22-201ENST00000442010 NSG1P42857 185 aa18.43■□□□□ 0.54
HMGB3P22-201ENST00000442010 CD151P48509 253 aa18.43■□□□□ 0.54
HMGB3P22-201ENST00000442010 GSTM4Q03013 218 aa18.43■□□□□ 0.54
HMGB3P22-201ENST00000442010 ABHD18Q0P651 414 aa18.43■□□□□ 0.54
HMGB3P22-201ENST00000442010 RPA4Q13156 261 aa18.43■□□□□ 0.54
HMGB3P22-201ENST00000442010 TSTD2Q5T7W7 516 aa18.43■□□□□ 0.54
HMGB3P22-201ENST00000442010 PPP1R21Q6ZMI0 780 aa18.43■□□□□ 0.54
HMGB3P22-201ENST00000442010 CCDC89Q8N998 374 aa18.43■□□□□ 0.54
HMGB3P22-201ENST00000442010 SGSM3Q96HU1 749 aa18.43■□□□□ 0.54
HMGB3P22-201ENST00000442010 SLC45A3Q96JT2 553 aa18.43■□□□□ 0.54
HMGB3P22-201ENST00000442010 CD180Q99467 661 aa18.43■□□□□ 0.54
HMGB3P22-201ENST00000442010 TRIT1Q9H3H1 467 aaKnown RBP18.43■□□□□ 0.54
HMGB3P22-201ENST00000442010 HRASLS2Q9NWW9 162 aa18.43■□□□□ 0.54
HMGB3P22-201ENST00000442010 PPP2R2CQ9Y2T4 447 aa18.43■□□□□ 0.54
HMGB3P22-201ENST00000442010 HEBP2Q9Y5Z4 205 aa18.43■□□□□ 0.54
HMGB3P22-201ENST00000442010 TLCD2A6NGC4 264 aa18.42■□□□□ 0.54
HMGB3P22-201ENST00000442010 E7EVH7 732 aa18.42■□□□□ 0.54
HMGB3P22-201ENST00000442010 APRTP07741 180 aa18.42■□□□□ 0.54
HMGB3P22-201ENST00000442010 GSE1Q14687 1217 aa18.42■□□□□ 0.54
HMGB3P22-201ENST00000442010 TBR1Q16650 682 aa18.42■□□□□ 0.54
HMGB3P22-201ENST00000442010 CERS6Q6ZMG9 384 aa18.42■□□□□ 0.54
HMGB3P22-201ENST00000442010 ZNF534Q76KX8 674 aa18.42■□□□□ 0.54
HMGB3P22-201ENST00000442010 OOSP2Q86WS3 158 aa18.42■□□□□ 0.54
HMGB3P22-201ENST00000442010 KMT5CQ86Y97 462 aa18.42■□□□□ 0.54
HMGB3P22-201ENST00000442010 D2HGDHQ8N465 521 aa18.42■□□□□ 0.54
HMGB3P22-201ENST00000442010 ACVR1CQ8NER5 493 aa18.42■□□□□ 0.54
HMGB3P22-201ENST00000442010 HDAC10Q969S8 669 aa18.42■□□□□ 0.54
HMGB3P22-201ENST00000442010 ULBP3Q9BZM4 244 aa18.42■□□□□ 0.54
HMGB3P22-201ENST00000442010 VPS37BQ9H9H4 285 aa18.42■□□□□ 0.54
HMGB3P22-201ENST00000442010 EIF2B3Q9NR50 452 aaKnown RBP18.42■□□□□ 0.54
HMGB3P22-201ENST00000442010 SMARCAL1Q9NZC9 954 aa18.42■□□□□ 0.54
HMGB3P22-201ENST00000442010 TCAF1Q9Y4C2 921 aa18.42■□□□□ 0.54
HMGB3P22-201ENST00000442010 GCN1Q92616 2671 aaKnown RBP18.42■□□□□ 0.54
HMGB3P22-201ENST00000442010 OR6C74A6NCV1 312 aa18.41■□□□□ 0.54
HMGB3P22-201ENST00000442010 SPAG6O75602 509 aa18.41■□□□□ 0.54
HMGB3P22-201ENST00000442010 GAS8O95995 478 aa18.41■□□□□ 0.54
HMGB3P22-201ENST00000442010 GOT2P00505 430 aaKnown RBP18.41■□□□□ 0.54
HMGB3P22-201ENST00000442010 FOLR1P15328 257 aa18.41■□□□□ 0.54
HMGB3P22-201ENST00000442010 STAT5AP42229 794 aa18.41■□□□□ 0.54
HMGB3P22-201ENST00000442010 PREPP48147 710 aa18.41■□□□□ 0.54
HMGB3P22-201ENST00000442010 LMAN1P49257 510 aa18.41■□□□□ 0.54
HMGB3P22-201ENST00000442010 KPNA2P52292 529 aaKnown RBP18.41■□□□□ 0.54
HMGB3P22-201ENST00000442010 LAMB3Q13751 1172 aa18.41■□□□□ 0.54
HMGB3P22-201ENST00000442010 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.41■□□□□ 0.54
HMGB3P22-201ENST00000442010 DNTTIP2Q5QJE6 756 aaKnown RBP18.41■□□□□ 0.54
HMGB3P22-201ENST00000442010 UNC5BQ8IZJ1 945 aa18.41■□□□□ 0.54
HMGB3P22-201ENST00000442010 ESX1Q8N693 406 aa18.41■□□□□ 0.54
HMGB3P22-201ENST00000442010 OR4E2Q8NGC2 313 aa18.41■□□□□ 0.54
HMGB3P22-201ENST00000442010 MAIP1Q8WWC4 291 aa18.41■□□□□ 0.54
HMGB3P22-201ENST00000442010 PEX13Q92968 403 aa18.41■□□□□ 0.54
HMGB3P22-201ENST00000442010 NRTNQ99748 197 aa18.41■□□□□ 0.54
HMGB3P22-201ENST00000442010 GPN2Q9H9Y4 310 aaPredicted RBP18.41■□□□□ 0.54
HMGB3P22-201ENST00000442010 IL17BQ9UHF5 180 aa18.41■□□□□ 0.54
HMGB3P22-201ENST00000442010 BOD1L1Q8NFC6 3051 aa18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 QSOX1O00391 747 aa18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 TERTO14746 1132 aaKnown RBP18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 KIAA0754O94854 1291 aa18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 TIAF1O95411 115 aa18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 CXCR5P32302 372 aa18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 KCNJ1P48048 391 aa18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 BOP1Q14137 746 aaKnown RBP18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 SEMA3AQ14563 771 aa18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 KCNAB1Q14722 419 aa18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 AFTPHQ6ULP2 937 aa18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 C4orf22Q6V702 233 aa18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 NLRP9Q7RTR0 991 aa18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 PPP1R3BQ86XI6 285 aa18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 CARFQ8N187 725 aa18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 SIDT2Q8NBJ9 832 aaKnown RBP18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 OR4L1Q8NH43 312 aa18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 RNF31Q96EP0 1072 aa18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 PPM1MQ96MI6 270 aa18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 FERD3LQ96RJ6 166 aa18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 TFB2MQ9H5Q4 396 aaKnown RBP18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 MVB12BQ9H7P6 319 aa18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 SPTA1P02549 2419 aa18.4■□□□□ 0.54
HMGB3P22-201ENST00000442010 UBA6A0AVT1 1052 aaPredicted RBP18.39■□□□□ 0.53
HMGB3P22-201ENST00000442010 SLC5A10A0PJK1 596 aa18.39■□□□□ 0.53
HMGB3P22-201ENST00000442010 ZNF891A8MT65 544 aaPredicted RBP18.39■□□□□ 0.53
HMGB3P22-201ENST00000442010 IFRD1O00458 451 aaPredicted RBP18.39■□□□□ 0.53
HMGB3P22-201ENST00000442010 LIN7AO14910 233 aaPredicted RBP18.39■□□□□ 0.53
HMGB3P22-201ENST00000442010 NKX2-8O15522 239 aa18.39■□□□□ 0.53
HMGB3P22-201ENST00000442010 CEP104O60308 925 aa18.39■□□□□ 0.53
HMGB3P22-201ENST00000442010 OR1I1O60431 355 aa18.39■□□□□ 0.53
HMGB3P22-201ENST00000442010 EBLN1P0CF75 366 aa18.39■□□□□ 0.53
HMGB3P22-201ENST00000442010 ITGB6P18564 788 aa18.39■□□□□ 0.53
HMGB3P22-201ENST00000442010 POLR2CP19387 275 aaPredicted RBP18.39■□□□□ 0.53
HMGB3P22-201ENST00000442010 F8A1P23610 371 aa18.39■□□□□ 0.53
HMGB3P22-201ENST00000442010 ACADLP28330 430 aa18.39■□□□□ 0.53
HMGB3P22-201ENST00000442010 ARCN1P48444 511 aaKnown RBP18.39■□□□□ 0.53
HMGB3P22-201ENST00000442010 HSD11B2P80365 405 aa18.39■□□□□ 0.53
HMGB3P22-201ENST00000442010 TUBB3Q13509 450 aa18.39■□□□□ 0.53
HMGB3P22-201ENST00000442010 LYPLAL1Q5VWZ2 237 aa18.39■□□□□ 0.53
HMGB3P22-201ENST00000442010 C6orf15Q6UXA7 325 aaPredicted RBP18.39■□□□□ 0.53
HMGB3P22-201ENST00000442010 BPHLQ86WA6 291 aaPredicted RBP18.39■□□□□ 0.53
HMGB3P22-201ENST00000442010 RASGRP3Q8IV61 690 aa18.39■□□□□ 0.53
HMGB3P22-201ENST00000442010 PRELID2Q8N945 189 aa18.39■□□□□ 0.53
HMGB3P22-201ENST00000442010 GALNT6Q8NCL4 622 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 172.3 ms