RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 MAD1L1Q9Y6D9 718 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 DNMT3AQ9Y6K1 912 aaPredicted RBP17.31■□□□□ 0.36
CCDC188-201ENST00000439765 PRSS21Q9Y6M0 314 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 SMG1Q96Q15 3661 aaKnown RBP17.31■□□□□ 0.36
CCDC188-201ENST00000439765 PRAMEF33A0A0G2JMD5 474 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 AGRPO00253 132 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 CD3EAPO15446 510 aaKnown RBP17.31■□□□□ 0.36
CCDC188-201ENST00000439765 KCNJ13O60928 360 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 VIPP01282 170 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 CSF2RBP32927 897 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 SLC19A1P41440 591 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 MAPK9P45984 424 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 GPR3P46089 330 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 PCBP4P57723 403 aaKnown RBP17.31■□□□□ 0.36
CCDC188-201ENST00000439765 ERVPABLB-1P60509 514 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 UBE2IP63279 158 aaKnown RBP17.31■□□□□ 0.36
CCDC188-201ENST00000439765 AARS2Q5JTZ9 985 aaKnown RBP17.31■□□□□ 0.36
CCDC188-201ENST00000439765 AGAP9Q5VTM2 703 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 DUS1LQ6P1R4 473 aaKnown RBP17.31■□□□□ 0.36
CCDC188-201ENST00000439765 ABRAXAS1Q6UWZ7 409 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 XKR5Q6UX68 686 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 TMPRSS9Q7Z410 1059 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 CFAP206Q8IYR0 622 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 ZNF248Q8NDW4 579 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 FBXO36Q8NEA4 188 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 GPR150Q8NGU9 434 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 HM13Q8TCT9 377 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 CAVIN3Q969G5 261 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 CXorf40BQ96DE9 158 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 STAMBPL1Q96FJ0 436 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 LINC00615Q96LM1 132 aaPredicted RBP17.31■□□□□ 0.36
CCDC188-201ENST00000439765 TTC1Q99614 292 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 NUDT22Q9BRQ3 303 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 NAT9Q9BTE0 207 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 PRORYQ9H606 182 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 VPS37BQ9H9H4 285 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 ASCL3Q9NQ33 180 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 CHMP2BQ9UQN3 213 aa17.31■□□□□ 0.36
CCDC188-201ENST00000439765 CFAP20Q9Y6A4 193 aaKnown RBP17.31■□□□□ 0.36
CCDC188-201ENST00000439765 IGHV1OR21-1A0A087WYE8 117 aa17.3■□□□□ 0.36
CCDC188-201ENST00000439765 ERLIN1O75477 346 aa17.3■□□□□ 0.36
CCDC188-201ENST00000439765 POLBP06746 335 aa17.3■□□□□ 0.36
CCDC188-201ENST00000439765 SLC35G4P0C7Q5 338 aa17.3■□□□□ 0.36
CCDC188-201ENST00000439765 C3orf38Q5JPI3 329 aa17.3■□□□□ 0.36
CCDC188-201ENST00000439765 LYPLAL1Q5VWZ2 237 aa17.3■□□□□ 0.36
CCDC188-201ENST00000439765 METRNLQ641Q3 311 aa17.3■□□□□ 0.36
CCDC188-201ENST00000439765 KIAA0930Q6ICG6 404 aaPredicted RBP17.3■□□□□ 0.36
CCDC188-201ENST00000439765 WASH2PQ6VEQ5 465 aa17.3■□□□□ 0.36
CCDC188-201ENST00000439765 CERS6Q6ZMG9 384 aa17.3■□□□□ 0.36
CCDC188-201ENST00000439765 USP53Q70EK8 1073 aa17.3■□□□□ 0.36
CCDC188-201ENST00000439765 AVL9Q8NBF6 648 aa17.3■□□□□ 0.36
CCDC188-201ENST00000439765 SPDYE1Q8NFV5 336 aaPredicted RBP17.3■□□□□ 0.36
CCDC188-201ENST00000439765 SGSM3Q96HU1 749 aa17.3■□□□□ 0.36
CCDC188-201ENST00000439765 C9orf72Q96LT7 481 aa17.3■□□□□ 0.36
CCDC188-201ENST00000439765 BBC3Q96PG8 261 aaPredicted RBP17.3■□□□□ 0.36
CCDC188-201ENST00000439765 CCM2Q9BSQ5 444 aa17.3■□□□□ 0.36
CCDC188-201ENST00000439765 WWP1Q9H0M0 922 aa17.3■□□□□ 0.36
CCDC188-201ENST00000439765 COG4Q9H9E3 785 aa17.3■□□□□ 0.36
CCDC188-201ENST00000439765 WASH6PQ9NQA3 447 aa17.3■□□□□ 0.36
CCDC188-201ENST00000439765 IMP3Q9NV31 184 aaKnown RBP17.3■□□□□ 0.36
CCDC188-201ENST00000439765 PCDHGA8Q9Y5G5 932 aa17.3■□□□□ 0.36
CCDC188-201ENST00000439765 RPS6KL1Q9Y6S9 549 aa17.3■□□□□ 0.36
CCDC188-201ENST00000439765 FAM237BA0A1B0GVD1 139 aa17.29■□□□□ 0.36
CCDC188-201ENST00000439765 A0A1W2PNU3 283 aaPredicted RBP17.29■□□□□ 0.36
CCDC188-201ENST00000439765 ZW10O43264 779 aa17.29■□□□□ 0.36
CCDC188-201ENST00000439765 AP2A2O94973 939 aa17.29■□□□□ 0.36
CCDC188-201ENST00000439765 CPNE6O95741 557 aa17.29■□□□□ 0.36
CCDC188-201ENST00000439765 XRCC1P18887 633 aaPredicted RBP17.29■□□□□ 0.36
CCDC188-201ENST00000439765 PAMP19021 973 aa17.29■□□□□ 0.36
CCDC188-201ENST00000439765 CD1CP29017 333 aa17.29■□□□□ 0.36
CCDC188-201ENST00000439765 PREPP48147 710 aa17.29■□□□□ 0.36
CCDC188-201ENST00000439765 TLE3Q04726 772 aa17.29■□□□□ 0.36
CCDC188-201ENST00000439765 TMEM135Q86UB9 458 aa17.29■□□□□ 0.36
CCDC188-201ENST00000439765 SPACA3Q8IXA5 215 aa17.29■□□□□ 0.36
CCDC188-201ENST00000439765 PALM2Q8IXS6 379 aa17.29■□□□□ 0.36
CCDC188-201ENST00000439765 OR10G6Q8NH81 332 aa17.29■□□□□ 0.36
CCDC188-201ENST00000439765 AHCYL2Q96HN2 611 aaKnown RBP17.29■□□□□ 0.36
CCDC188-201ENST00000439765 RMDN2Q96LZ7 410 aa17.29■□□□□ 0.36
CCDC188-201ENST00000439765 C12orf66Q96MD2 445 aa17.29■□□□□ 0.36
CCDC188-201ENST00000439765 TBC1D10AQ9BXI6 508 aa17.29■□□□□ 0.36
CCDC188-201ENST00000439765 CDC42EP4Q9H3Q1 356 aaKnown RBP17.29■□□□□ 0.36
CCDC188-201ENST00000439765 POT1Q9NUX5 634 aa17.29■□□□□ 0.36
CCDC188-201ENST00000439765 ZC3H7BQ9UGR2 993 aaKnown RBP17.29■□□□□ 0.36
CCDC188-201ENST00000439765 PMS2P1A4D2B8 440 aa17.28■□□□□ 0.36
CCDC188-201ENST00000439765 KLHL33A6NCF5 533 aa17.28■□□□□ 0.36
CCDC188-201ENST00000439765 DUX1O43812 170 aa17.28■□□□□ 0.36
CCDC188-201ENST00000439765 PGAM1P18669 254 aa17.28■□□□□ 0.36
CCDC188-201ENST00000439765 PPARGP37231 505 aaPredicted RBP17.28■□□□□ 0.36
CCDC188-201ENST00000439765 TTPAP49638 278 aa17.28■□□□□ 0.36
CCDC188-201ENST00000439765 PMS2P54278 862 aa17.28■□□□□ 0.36
CCDC188-201ENST00000439765 INHBCP55103 352 aa17.28■□□□□ 0.36
CCDC188-201ENST00000439765 BOP1Q14137 746 aaKnown RBP17.28■□□□□ 0.36
CCDC188-201ENST00000439765 GPR18Q14330 331 aa17.28■□□□□ 0.36
CCDC188-201ENST00000439765 RPE65Q16518 533 aa17.28■□□□□ 0.36
CCDC188-201ENST00000439765 KYNUQ16719 465 aa17.28■□□□□ 0.36
CCDC188-201ENST00000439765 PHF19Q5T6S3 580 aa17.28■□□□□ 0.36
CCDC188-201ENST00000439765 NAPRTQ6XQN6 538 aa17.28■□□□□ 0.36
CCDC188-201ENST00000439765 TMEM26Q6ZUK4 368 aa17.28■□□□□ 0.36
CCDC188-201ENST00000439765 TRMT10CQ7L0Y3 403 aaKnown RBP17.28■□□□□ 0.36
CCDC188-201ENST00000439765 PIM3Q86V86 326 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms