RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ATXN7L3BQ96GX2 97 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 BIRC8Q96P09 236 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 LRRC1Q9BTT6 524 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 FOXP3Q9BZS1 431 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 PHACTR1Q9C0D0 580 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 MVB12BQ9H7P6 319 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 RDH14Q9HBH5 336 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 IL1RAPL1Q9NZN1 696 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 PDP2Q9P2J9 529 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 DKK4Q9UBT3 224 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 CHMP2BQ9UQN3 213 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 CRYL1Q9Y2S2 319 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 COMMD10Q9Y6G5 202 aa11.54□□□□□ -0.56
HSPG2-206ENST00000439717 COL27A1Q8IZC6 1860 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-206ENST00000439717 PRAMEF33A0A0G2JMD5 474 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 IGHV5-10-1A0A0J9YXX1 117 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 IQCF5A8MTL0 148 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 BHMG1C9JSJ3 638 aaPredicted RBP11.53□□□□□ -0.56
HSPG2-206ENST00000439717 HGSO14964 777 aaPredicted RBP11.53□□□□□ -0.56
HSPG2-206ENST00000439717 GPC4O75487 556 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 SLCO2B1O94956 709 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 PROS1P07225 676 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 PKMP14618 531 aaKnown RBP11.53□□□□□ -0.56
HSPG2-206ENST00000439717 HOXB3P14651 431 aaPredicted RBP11.53□□□□□ -0.56
HSPG2-206ENST00000439717 AMD1P17707 334 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 ITGB6P18564 788 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 AOAHP28039 575 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 ACADLP28330 430 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 FMO4P31512 558 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 CSF2RBP32927 897 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 SLC1A2P43004 574 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 MAPK9P45984 424 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 LSSP48449 732 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 PPM1FP49593 454 aaPredicted RBP11.53□□□□□ -0.56
HSPG2-206ENST00000439717 CFHR1Q03591 330 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 CTBP1Q13363 440 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 BRD3Q15059 726 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 GLE1Q53GS7 698 aaKnown RBP11.53□□□□□ -0.56
HSPG2-206ENST00000439717 CTSL3PQ5NE16 218 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 IGF2-ASQ6U949 168 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 UNC5AQ6ZN44 842 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 ZNF574Q6ZN55 896 aaPredicted RBP11.53□□□□□ -0.56
HSPG2-206ENST00000439717 KIAA0408Q6ZU52 694 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 TMPRSS9Q7Z410 1059 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 B3GNT8Q7Z7M8 397 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 GALNT7Q86SF2 657 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 PLXDC1Q8IUK5 500 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 DENND6AQ8IWF6 608 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 CNTN4Q8IWV2 1026 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 SLC22A15Q8IZD6 547 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 LSMEM2Q8N112 164 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 KRT222Q8N1A0 295 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 C2CD4AQ8NCU7 369 aaPredicted RBP11.53□□□□□ -0.56
HSPG2-206ENST00000439717 WDR36Q8NI36 951 aaKnown RBP11.53□□□□□ -0.56
HSPG2-206ENST00000439717 SEC14L1Q92503 715 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 NCSTNQ92542 709 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 TFGQ92734 400 aaPredicted RBP11.53□□□□□ -0.56
HSPG2-206ENST00000439717 FERD3LQ96RJ6 166 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 WDR83Q9BRX9 315 aaKnown RBP11.53□□□□□ -0.56
HSPG2-206ENST00000439717 RAB33BQ9H082 229 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 ZMYND15Q9H091 742 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 SEMA6CQ9H3T2 930 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 KIR3DX1Q9H7L2 352 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 POLR1BQ9H9Y6 1135 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 LATS2Q9NRM7 1088 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 IARS2Q9NSE4 1012 aaKnown RBP11.53□□□□□ -0.56
HSPG2-206ENST00000439717 AKAP7Q9P0M2 348 aaPredicted RBP11.53□□□□□ -0.56
HSPG2-206ENST00000439717 KLHL42Q9P2K6 505 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 SLC24A2Q9UI40 661 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 FBXO5Q9UKT4 447 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 CDYLQ9Y232 598 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 PCDHGA8Q9Y5G5 932 aa11.53□□□□□ -0.56
HSPG2-206ENST00000439717 CFAP20Q9Y6A4 193 aaKnown RBP11.53□□□□□ -0.56
HSPG2-206ENST00000439717 C1QTNF9BB2RNN3 333 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 C1QTNF9P0C862 333 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 ERVK-10P10266 1014 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 THRAP10827 490 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 TYRP1P17643 537 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 MLLT3P42568 568 aaPredicted RBP11.52□□□□□ -0.57
HSPG2-206ENST00000439717 CAPZBP47756 277 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 LEPRP48357 1165 aaKnown RBP11.52□□□□□ -0.57
HSPG2-206ENST00000439717 PLTPP55058 493 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 GABREP78334 506 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 SLC7A5Q01650 507 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 HSPA14Q0VDF9 509 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 PLCL1Q15111 1095 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 ZNF789Q5FWF6 425 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 HP1BP3Q5SSJ5 553 aaPredicted RBP11.52□□□□□ -0.57
HSPG2-206ENST00000439717 PLEKHS1Q5SXH7 462 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 PHF19Q5T6S3 580 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 DUS1LQ6P1R4 473 aaKnown RBP11.52□□□□□ -0.57
HSPG2-206ENST00000439717 ZDHHC24Q6UX98 284 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 NAPRTQ6XQN6 538 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 OTOAQ7RTW8 1153 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 ANKMY2Q8IV38 441 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 TBC1D21Q8IYX1 336 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 ZBED8Q8IZ13 594 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 UNC5BQ8IZJ1 945 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 FBXO36Q8NEA4 188 aa11.52□□□□□ -0.57
HSPG2-206ENST00000439717 ACVR1CQ8NER5 493 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms