RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 IL11RAQ14626 422 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 TMEM211Q6ICI0 200 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 PLXDC2Q6UX71 529 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 FAM47EQ6ZV65 393 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 PIWIL4Q7Z3Z4 852 aaKnown RBP3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 LDB1Q86U70 411 aaPredicted RBP3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 CUZD1Q86UP6 607 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 FBXO39Q8N4B4 442 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 TDRD5Q8NAT2 981 aaKnown RBP3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 RBM15BQ8NDT2 890 aaKnown RBP3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 TBC1D16Q8TBP0 767 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 INPP4AQ96PE3 977 aaPredicted RBP3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 MOV10L1Q9BXT6 1211 aaKnown RBP3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 ANKRD2Q9GZV1 360 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 GOLPH3LQ9H4A5 285 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 HHATLQ9HCP6 504 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 TRPC7Q9HCX4 862 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 TCF7L2Q9NQB0 619 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 FAM118AQ9NWS6 357 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 TAAR2Q9P1P5 351 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 C5AR2Q9P296 337 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 ANAPC2Q9UJX6 822 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 A0A1W2PPI3 338 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 TRBC2A0A5B9 178 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 MAGEB17A8MXT2 336 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 P2RY10O00398 339 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 IPO8O15397 1037 aaKnown RBP3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 PRAMEF11O60813 436 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 CTSVO60911 334 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 BAG4O95429 457 aaKnown RBP3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 HSPA4LO95757 839 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 LIPFP07098 398 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 KRT19P08727 400 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 MARK3P27448 753 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 MC5RP33032 325 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 CDH13P55290 713 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 CAMK2DQ13557 499 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 ALCAMQ13740 583 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 MELKQ14680 651 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 KIR2DS3Q14952 304 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 SNAPC1Q16533 368 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 DUOXA1Q1HG43 343 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 ZNF628Q5EBL2 1059 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 TCP11X2Q5H9J9 407 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 GCNT6Q5T4J0 391 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 NDUFAF5Q5TEU4 345 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 C6orf163Q5TEZ5 329 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 KRT77Q7Z794 578 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 SMIM29Q86T20 159 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 VSIG1Q86XK7 387 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 AFAP1Q8N556 730 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 PAPD5Q8NDF8 572 aaKnown RBP3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 SLC24A4Q8NFF2 622 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 TEKT4Q8WW24 435 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 DNASE2BQ8WZ79 361 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 ZNF653Q96CK0 615 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 RMDN1Q96DB5 314 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 HES6Q96HZ4 224 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 UHRF2Q96PU4 802 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 NEK1Q96PY6 1258 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 SLX1AQ9BQ83 275 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 MMP28Q9H239 520 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 PPIL3Q9H2H8 161 aaKnown RBP3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 UPF2Q9HAU5 1272 aaKnown RBP3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 ZFP57Q9NU63 452 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 MIOSQ9NXC5 875 aa3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 FAF1Q9UNN5 650 aaPredicted RBP3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 WBP11Q9Y2W2 641 aaKnown RBP3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 ASTN2O75129 1339 aaPredicted RBP3.47□□□□□ -1.85
TRAPPC13-204ENST00000438419 C5orf60A6NFR6 353 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 SSX4O60224 188 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 LMX1BO60663 402 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 CREG1O75629 220 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 IGLV2-11P01706 119 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 H1F0P07305 194 aaKnown RBP3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 CCR3P51677 355 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 PHEXP78562 749 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 PLA2G7Q13093 441 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 NR1D2Q14995 579 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 RBBP5Q15291 538 aaKnown RBP3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 KRBOX4Q5JUW0 171 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 STPG1Q5TH74 334 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 ALS2CLQ60I27 953 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 KRT80Q6KB66 452 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 KLC3Q6P597 504 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 TEX38Q6PEX7 206 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 C19orf48Q6RUI8 117 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 CAMKMTQ7Z624 323 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 CEP57Q86XR8 500 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 PTOV1Q86YD1 416 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 GPALPP1Q8IXQ4 340 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 CFAP61Q8NHU2 1237 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 ZFAND2BQ8WV99 257 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 MRPS27Q92552 414 aaKnown RBP3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 SEMA4DQ92854 862 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 ERLEC1Q96DZ1 483 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 MTERF3Q96E29 417 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 ST6GAL2Q96JF0 529 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 C17orf77Q96MU5 243 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 TRMT61BQ9BVS5 477 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms