RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 ZNF691Q5VV52 312 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 LCLAT1Q6UWP7 414 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 EID3Q8N140 333 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 PAPD5Q8NDF8 572 aaKnown RBP7.35□□□□□ -1.23
CPSF6-202ENST00000435070 ANGPTL6Q8NI99 470 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 AFG1LQ8WV93 481 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 TRAPPC12Q8WVT3 735 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 DEDD2Q8WXF8 326 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 SEPT1Q8WYJ6 367 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 MRPL45Q9BRJ2 306 aaKnown RBP7.35□□□□□ -1.23
CPSF6-202ENST00000435070 FICDQ9BVA6 458 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 RERGLQ9H628 205 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 RNF6Q9Y252 685 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 M0QYT0 321 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 PGRP06401 933 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 CYP2C8P10632 490 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 ARL2P36404 184 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 DCTP40126 519 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 ETV3P41162 512 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 MAPK12P53778 367 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 RGMBQ6NW40 437 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 CYP4Z1Q86W10 505 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 SLC47A1Q96FL8 570 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 HDHD5Q9BXW7 423 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 SLC22A3O75751 556 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 FKBP9O95302 570 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 TP53P04637 393 aaPredicted RBP7.35□□□□□ -1.23
CPSF6-202ENST00000435070 CYP2B6P20813 491 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 SLC35A2P78381 396 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 MVKQ03426 396 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 SYT6Q5T7P8 510 aaPredicted RBP7.35□□□□□ -1.23
CPSF6-202ENST00000435070 FAM180AQ6UWF9 173 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 LRRC8DQ7L1W4 858 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 CDH24Q86UP0 819 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 BCO2Q9BYV7 579 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 ZFP14Q9HCL3 533 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 SDR39U1Q9NRG7 319 aaPredicted RBP7.35□□□□□ -1.23
CPSF6-202ENST00000435070 LEF1Q9UJU2 399 aaPredicted RBP7.35□□□□□ -1.23
CPSF6-202ENST00000435070 RGS20O76081 388 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 PIGRP01833 764 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 IGFBP5P24593 272 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 PRDX3P30048 256 aaKnown RBP7.35□□□□□ -1.23
CPSF6-202ENST00000435070 NPY2RP49146 381 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 POLR2JP52435 117 aaKnown RBP7.35□□□□□ -1.23
CPSF6-202ENST00000435070 DNAJB13P59910 316 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 KRR1Q13601 381 aaKnown RBP7.35□□□□□ -1.23
CPSF6-202ENST00000435070 PLEKHG6Q3KR16 790 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 ATF7IP2Q5U623 682 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 FAM126BQ8IXS8 530 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 LRRC3Q9BY71 257 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 DNAJB9Q9UBS3 223 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 STAP1Q9ULZ2 295 aa7.35□□□□□ -1.23
CPSF6-202ENST00000435070 CIB4A0PJX0 185 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 ARVCFO00192 962 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 IMPDH1P20839 514 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 CA5AP35218 305 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 CTSKP43235 329 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 ARHGDIAP52565 204 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 SP2Q02086 613 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 TOR2AQ5JU69 321 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 ZNF678Q5SXM1 525 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 ABHD15Q6UXT9 468 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 MILR1Q7Z6M3 343 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 VSIG10LQ86VR7 867 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 FNDC5Q8NAU1 212 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 TOR1AIP2Q8NFQ8 470 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 OR8H1Q8NGG4 311 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 SLC38A4Q969I6 547 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 MSANTD3Q96H12 275 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 RNF146Q9NTX7 359 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 MUTYHQ9UIF7 546 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 TMPRSS11EQ9UL52 423 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 VPS4AQ9UN37 437 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 HCN4Q9Y3Q4 1203 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 OR51F1A6NGY5 319 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 PLK4O00444 970 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 PLA2G6O60733 806 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 ARHGEF15O94989 841 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 SUPT20HL2P0C7V6 817 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 ZNF250P15622 560 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 ZNF45Q02386 682 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 SNTA1Q13424 505 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 PKN3Q6P5Z2 889 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 TUBA3EQ6PEY2 450 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 Q6ZPB1 254 aaPredicted RBP7.34□□□□□ -1.23
CPSF6-202ENST00000435070 SLC51BQ86UW2 128 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 ZNF557Q8N988 423 aaPredicted RBP7.34□□□□□ -1.23
CPSF6-202ENST00000435070 TSEN34Q9BSV6 310 aaKnown RBP7.34□□□□□ -1.23
CPSF6-202ENST00000435070 FER1L6Q2WGJ9 1857 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 H3BQ06 376 aaPredicted RBP7.34□□□□□ -1.23
CPSF6-202ENST00000435070 DFNA5O60443 496 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 TXNP10599 105 aaKnown RBP7.34□□□□□ -1.23
CPSF6-202ENST00000435070 CYP2A6P11509 494 aaPredicted RBP7.34□□□□□ -1.23
CPSF6-202ENST00000435070 PKLRP30613 574 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 GLUD2P49448 558 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 EEFSECP57772 596 aaKnown RBP7.34□□□□□ -1.23
CPSF6-202ENST00000435070 C19orf57Q0VDD7 668 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 TIGD6Q17RP2 521 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 LINC00299Q6ZSB3 139 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 GALNT7Q86SF2 657 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms