RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.02□□□□□ -1.93
CLK1-204ENST00000432425 SLCO1B7G3V0H7 640 aa3.02□□□□□ -1.93
CLK1-204ENST00000432425 EDN1P05305 212 aa3.02□□□□□ -1.93
CLK1-204ENST00000432425 FAM157CP0CG43 387 aa3.02□□□□□ -1.93
CLK1-204ENST00000432425 CEACAM8P31997 349 aaPredicted RBP3.02□□□□□ -1.93
CLK1-204ENST00000432425 SNRPD1P62314 119 aaKnown RBP3.02□□□□□ -1.93
CLK1-204ENST00000432425 KCNC3Q14003 757 aa3.02□□□□□ -1.93
CLK1-204ENST00000432425 KRT33BQ14525 404 aa3.02□□□□□ -1.93
CLK1-204ENST00000432425 RRS1Q15050 365 aaKnown RBP3.02□□□□□ -1.93
CLK1-204ENST00000432425 TBC1D16Q8TBP0 767 aa3.02□□□□□ -1.93
CLK1-204ENST00000432425 DAZLQ92904 295 aaKnown RBP3.02□□□□□ -1.93
CLK1-204ENST00000432425 MTERF3Q96E29 417 aa3.02□□□□□ -1.93
CLK1-204ENST00000432425 GIMAP5Q96F15 307 aa3.02□□□□□ -1.93
CLK1-204ENST00000432425 SLC22A12Q96S37 553 aa3.02□□□□□ -1.93
CLK1-204ENST00000432425 MYADMQ96S97 322 aa3.02□□□□□ -1.93
CLK1-204ENST00000432425 RTP3Q9BQQ7 232 aa3.02□□□□□ -1.93
CLK1-204ENST00000432425 ERVMER34-1Q9H9K5 563 aa3.02□□□□□ -1.93
CLK1-204ENST00000432425 HHATLQ9HCP6 504 aa3.02□□□□□ -1.93
CLK1-204ENST00000432425 ATAD3AQ9NVI7 634 aa3.02□□□□□ -1.93
CLK1-204ENST00000432425 RASAL2Q9UJF2 1139 aa3.02□□□□□ -1.93
CLK1-204ENST00000432425 EXO1Q9UQ84 846 aaKnown RBP3.02□□□□□ -1.93
CLK1-204ENST00000432425 RNF215Q9Y6U7 377 aa3.02□□□□□ -1.93
CLK1-204ENST00000432425 DISP3Q9P2K9 1392 aa3.02□□□□□ -1.93
CLK1-204ENST00000432425 A0A087X002 238 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 A0A1W2PRB8 838 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 ELOVL7A1L3X0 281 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 MEIOCA2RUB1 952 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 PGPEP1LA6NFU8 196 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 OR2C1O95371 312 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 NADKO95544 446 aaPredicted RBP3.01□□□□□ -1.93
CLK1-204ENST00000432425 NGFP01138 241 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 WNT5AP41221 380 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 BMXP51813 675 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 SLC1A5Q15758 541 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 KRT71Q3SY84 523 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 CLEC17AQ6ZS10 378 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 ZNF554Q86TJ5 538 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 MCEMP1Q8IX19 187 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 MRGPRDQ8TDS7 321 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 GMPPAQ96IJ6 420 aaPredicted RBP3.01□□□□□ -1.93
CLK1-204ENST00000432425 FAM81BQ96LP2 452 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 SRSF8Q9BRL6 282 aaKnown RBP3.01□□□□□ -1.93
CLK1-204ENST00000432425 TRAF4Q9BUZ4 470 aaPredicted RBP3.01□□□□□ -1.93
CLK1-204ENST00000432425 ZNF71Q9NQZ8 489 aaPredicted RBP3.01□□□□□ -1.93
CLK1-204ENST00000432425 EIF2B3Q9NR50 452 aaKnown RBP3.01□□□□□ -1.93
CLK1-204ENST00000432425 BARHL2Q9NY43 387 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 TAS2R14Q9NYV8 317 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 PI4KAP2A4QPH2 592 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 F5H0A9 414 aaPredicted RBP3.01□□□□□ -1.93
CLK1-204ENST00000432425 CCER2I3L3R5 266 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 DNM1LO00429 736 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 RSL1D1O76021 490 aaKnown RBP3.01□□□□□ -1.93
CLK1-204ENST00000432425 ACP2P11117 423 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 ARF3P61204 181 aaPredicted RBP3.01□□□□□ -1.93
CLK1-204ENST00000432425 ARF1P84077 181 aaKnown RBP3.01□□□□□ -1.93
CLK1-204ENST00000432425 TAF13Q15543 124 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 PWWP2BQ6NUJ5 590 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 CORO6Q6QEF8 472 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 PCGF5Q86SE9 256 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 ZNF383Q8NA42 475 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 PPFIBP2Q8ND30 876 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 MAPK1IP1LQ8NDC0 245 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 OR1J1Q8NGS3 322 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 OR2T6Q8NHC8 308 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 ANKRD9Q96BM1 317 aaPredicted RBP3.01□□□□□ -1.93
CLK1-204ENST00000432425 CCDC34Q96HJ3 373 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 MPP4Q96JB8 637 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 TRIM51Q9BSJ1 452 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 SMARCAD1Q9H4L7 1026 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 CHMP1AQ9HD42 196 aaPredicted RBP3.01□□□□□ -1.93
CLK1-204ENST00000432425 SEPT11Q9NVA2 429 aaKnown RBP3.01□□□□□ -1.93
CLK1-204ENST00000432425 NPAP1Q9NZP6 1156 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 FLRT3Q9NZU0 649 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 NAP1L2Q9ULW6 460 aaPredicted RBP3.01□□□□□ -1.93
CLK1-204ENST00000432425 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
CLK1-204ENST00000432425 IGHV4-4A0A075B6R2 117 aa3□□□□□ -1.93
CLK1-204ENST00000432425 IGLV9-49A0A0B4J1Y8 123 aa3□□□□□ -1.93
CLK1-204ENST00000432425 IGHV4-61A0A0C4DH41 118 aa3□□□□□ -1.93
CLK1-204ENST00000432425 A0A0J9YWU9 116 aa3□□□□□ -1.93
CLK1-204ENST00000432425 PRSS51A0A1B0GVH4 220 aa3□□□□□ -1.93
CLK1-204ENST00000432425 LRRC72A6NJI9 287 aa3□□□□□ -1.93
CLK1-204ENST00000432425 CDRT15L2A8MXV6 281 aa3□□□□□ -1.93
CLK1-204ENST00000432425 ZNF197O14709 1029 aa3□□□□□ -1.93
CLK1-204ENST00000432425 USO1O60763 962 aaKnown RBP3□□□□□ -1.93
CLK1-204ENST00000432425 IGHV4-59P01825 116 aa3□□□□□ -1.93
CLK1-204ENST00000432425 FRMD6-AS1P0C7T7 363 aa3□□□□□ -1.93
CLK1-204ENST00000432425 PRLRP16471 622 aa3□□□□□ -1.93
CLK1-204ENST00000432425 MRPS5P82675 430 aaKnown RBP3□□□□□ -1.93
CLK1-204ENST00000432425 LGALS3BPQ08380 585 aa3□□□□□ -1.93
CLK1-204ENST00000432425 DDX10Q13206 875 aaKnown RBP3□□□□□ -1.93
CLK1-204ENST00000432425 GPR17Q13304 367 aa3□□□□□ -1.93
CLK1-204ENST00000432425 FAM98BQ52LJ0 330 aaKnown RBP3□□□□□ -1.93
CLK1-204ENST00000432425 ADAMTSL4-AS1Q5T5F5 129 aa3□□□□□ -1.93
CLK1-204ENST00000432425 FAAP20Q6NZ36 180 aa3□□□□□ -1.93
CLK1-204ENST00000432425 BHLHB9Q6PI77 547 aa3□□□□□ -1.93
CLK1-204ENST00000432425 INTS8Q75QN2 995 aaKnown RBP3□□□□□ -1.93
CLK1-204ENST00000432425 SLC16A9Q7RTY1 509 aa3□□□□□ -1.93
CLK1-204ENST00000432425 ADGRF2Q8IZF7 708 aa3□□□□□ -1.93
CLK1-204ENST00000432425 ZNF611Q8N823 705 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms