RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 KCND1Q9NSA2 647 aa13.54□□□□□ -0.24
SEC13-211ENST00000431352 SNX7Q9UNH6 387 aa13.54□□□□□ -0.24
SEC13-211ENST00000431352 FARSAQ9Y285 508 aaKnown RBP13.54□□□□□ -0.24
SEC13-211ENST00000431352 TNRC6AQ8NDV7 1962 aaKnown RBP13.54□□□□□ -0.24
SEC13-211ENST00000431352 SPENQ96T58 3664 aaKnown RBP13.54□□□□□ -0.24
SEC13-211ENST00000431352 CCDC66A2RUB6 948 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 CLEC18AA5D8T8 446 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 TMEM150CB9EJG8 249 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 KCNN4O15554 427 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 SGTAO43765 313 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 STK10O94804 968 aaKnown RBP13.53□□□□□ -0.24
SEC13-211ENST00000431352 KLK3P07288 261 aaPredicted RBP13.53□□□□□ -0.24
SEC13-211ENST00000431352 GP1BBP13224 206 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 ITGALP20701 1170 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 HADHBP55084 474 aaKnown RBP13.53□□□□□ -0.24
SEC13-211ENST00000431352 PRPSAP1Q14558 356 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 NADK2Q4G0N4 442 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 LCN10Q6JVE6 187 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 C11orf63Q6NUN7 778 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 CLEC18BQ6UXF7 455 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 NXPE1Q8N323 547 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 ENDOVQ8N8Q3 282 aaKnown RBP13.53□□□□□ -0.24
SEC13-211ENST00000431352 CLEC18CQ8NCF0 446 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 CCDC110Q8TBZ0 833 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 HM13Q8TCT9 377 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 LCN9Q8WX39 176 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 THAP4Q8WY91 577 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 SEC14L1Q92503 715 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 ULK4Q96C45 1275 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 CLIP3Q96DZ5 547 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 FERD3LQ96RJ6 166 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 FERMT1Q9BQL6 677 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 ING2Q9H160 280 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 SRMSQ9H3Y6 488 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 LUZP4Q9P127 313 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 POMT2Q9UKY4 750 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 BTRCQ9Y297 605 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 COLEC10Q9Y6Z7 277 aa13.53□□□□□ -0.24
SEC13-211ENST00000431352 USP9XQ93008 2570 aaPredicted RBP13.53□□□□□ -0.24
SEC13-211ENST00000431352 C5orf60A6NFR6 353 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 CFAP99D6REC4 459 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 VPS4BO75351 444 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 CRTAMO95727 393 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 RECKO95980 971 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 PVRP15151 417 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 CYP2A7P20853 494 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 PTMSP20962 102 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 GNLYP22749 145 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 NDUFS1P28331 727 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 ADRA1AP35348 466 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 PREPP48147 710 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 CD97P48960 835 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 LMAN1P49257 510 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 PRLHRP49683 370 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 ZNF140P52738 457 aaPredicted RBP13.52□□□□□ -0.25
SEC13-211ENST00000431352 EIF3EP60228 445 aaKnown RBP13.52□□□□□ -0.25
SEC13-211ENST00000431352 XIAPP98170 497 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 TBX2Q13207 712 aaPredicted RBP13.52□□□□□ -0.25
SEC13-211ENST00000431352 LAMB3Q13751 1172 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 PTCHD3Q3KNS1 767 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 ANKRD20A2Q5SQ80 823 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 ANKRD20A1Q5TYW2 823 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 ANKRD20A3Q5VUR7 823 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 DARS2Q6PI48 645 aaKnown RBP13.52□□□□□ -0.25
SEC13-211ENST00000431352 ACVR1CQ8NER5 493 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 OR8K5Q8NH50 307 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 OR1L3Q8NH93 324 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 CPT1CQ8TCG5 803 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 CPT1BQ92523 772 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 COPS8Q99627 209 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 TBL1YQ9BQ87 522 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 HGH1Q9BTY7 390 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 SLC7A5P2Q9GIP4 190 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 XKR8Q9H6D3 395 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 COG4Q9H9E3 785 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 VPS4AQ9UN37 437 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 AAR2Q9Y312 384 aaKnown RBP13.52□□□□□ -0.25
SEC13-211ENST00000431352 PCDHA13Q9Y5I0 950 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 HEBP2Q9Y5Z4 205 aa13.52□□□□□ -0.25
SEC13-211ENST00000431352 USP9YO00507 2555 aaPredicted RBP13.52□□□□□ -0.25
SEC13-211ENST00000431352 SPTAN1Q13813 2472 aaKnown RBP13.51□□□□□ -0.25
SEC13-211ENST00000431352 KLHL33A6NCF5 533 aa13.51□□□□□ -0.25
SEC13-211ENST00000431352 MEN1O00255 615 aa13.51□□□□□ -0.25
SEC13-211ENST00000431352 IFRD1O00458 451 aaPredicted RBP13.51□□□□□ -0.25
SEC13-211ENST00000431352 BTN3A3O00478 584 aa13.51□□□□□ -0.25
SEC13-211ENST00000431352 PJA2O43164 708 aa13.51□□□□□ -0.25
SEC13-211ENST00000431352 PRSS56P0CW18 603 aa13.51□□□□□ -0.25
SEC13-211ENST00000431352 RBP3P10745 1247 aa13.51□□□□□ -0.25
SEC13-211ENST00000431352 PYGMP11217 842 aa13.51□□□□□ -0.25
SEC13-211ENST00000431352 ST6GAL1P15907 406 aa13.51□□□□□ -0.25
SEC13-211ENST00000431352 MC4RP32245 332 aa13.51□□□□□ -0.25
SEC13-211ENST00000431352 CDKN1CP49918 316 aaPredicted RBP13.51□□□□□ -0.25
SEC13-211ENST00000431352 NAP1L1P55209 391 aaKnown RBP13.51□□□□□ -0.25
SEC13-211ENST00000431352 GSDMDP57764 484 aa13.51□□□□□ -0.25
SEC13-211ENST00000431352 SPA17Q15506 151 aa13.51□□□□□ -0.25
SEC13-211ENST00000431352 ZRANB3Q5FWF4 1079 aa13.51□□□□□ -0.25
SEC13-211ENST00000431352 CAPRIN2Q6IMN6 1127 aaKnown RBP13.51□□□□□ -0.25
SEC13-211ENST00000431352 AADACL2Q6P093 401 aa13.51□□□□□ -0.25
SEC13-211ENST00000431352 FAM198BQ6UWH4 519 aa13.51□□□□□ -0.25
SEC13-211ENST00000431352 RANBP10Q6VN20 620 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms