RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 TTLL9Q3SXZ7 439 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 PLPP4Q5VZY2 271 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 TTC23LQ6PF05 361 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 IL27RAQ6UWB1 636 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 TRIM46Q7Z4K8 759 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 MILR1Q7Z6M3 343 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 GALNT13Q8IUC8 556 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 ZNF557Q8N988 423 aaPredicted RBP13.69□□□□□ -0.22
HOXC4-202ENST00000430889 FNDC5Q8NAU1 212 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 SPPL3Q8TCT6 385 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 PBXIP1Q96AQ6 731 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 BBS2Q9BXC9 721 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 LINC00597Q9H2U6 94 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 CCM2LQ9NUG4 571 aaPredicted RBP13.69□□□□□ -0.22
HOXC4-202ENST00000430889 ASIC5Q9NY37 505 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 NFKBIL1Q9UBC1 381 aaPredicted RBP13.69□□□□□ -0.22
HOXC4-202ENST00000430889 CCDC154A6NI56 674 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 ZNF839A8K0R7 811 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 SGTAO43765 313 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 NUAK1O60285 661 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 GUCA1CO95843 209 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 JAK1P23458 1154 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 GDF5P43026 501 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 HSPA13P48723 471 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 GSK3BP49841 420 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 EEFSECP57772 596 aaKnown RBP13.69□□□□□ -0.22
HOXC4-202ENST00000430889 DCDC1P59894 354 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 NFYCQ13952 458 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 ZXDCQ2QGD7 858 aaPredicted RBP13.69□□□□□ -0.22
HOXC4-202ENST00000430889 FBXO46Q6PJ61 603 aaPredicted RBP13.69□□□□□ -0.22
HOXC4-202ENST00000430889 ELMSAN1Q6PJG2 1045 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 CYP20A1Q6UW02 462 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 DLEU7Q6UYE1 221 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 GDPD4Q6W3E5 623 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 DNAJC5GQ8N7S2 189 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 ANKFN1Q8N957 763 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 FAM110BQ8TC76 370 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 CANT1Q8WVQ1 401 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 USP7Q93009 1102 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 ASIC4Q96FT7 647 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 ZNF597Q96LX8 424 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 BEGAINQ9BUH8 593 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 WBP1LQ9NX94 342 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 UBAP1Q9NZ09 502 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 WWOXQ9NZC7 414 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 OPTCQ9UBM4 332 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 SUN2Q9UH99 717 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 FBXO10Q9UK96 956 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 ERVW-1Q9UQF0 538 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 AP4B1Q9Y6B7 739 aa13.69□□□□□ -0.22
HOXC4-202ENST00000430889 MUC22E2RYF6 1773 aaPredicted RBP13.69□□□□□ -0.22
HOXC4-202ENST00000430889 TCRBV5S2A0A599 114 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 C7orf72A4D263 438 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 ZBBXA8MT70 800 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 ARPC2O15144 300 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 RSL1D1O76021 490 aaKnown RBP13.68□□□□□ -0.22
HOXC4-202ENST00000430889 FGBP02675 491 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 EBLN1P0CF75 366 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 SMIM18P0DKX4 95 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 G6PDP11413 515 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 BMP2P12643 396 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 ZNF30P17039 623 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 PAX7P23759 505 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 CHN2P52757 468 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 PRKG2Q13237 762 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 MAP7D1Q3KQU3 841 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 TIGD2Q4W5G0 525 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 RFTN2Q52LD8 501 aaPredicted RBP13.68□□□□□ -0.22
HOXC4-202ENST00000430889 LY6G5CQ5SRR4 150 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 BRAT1Q6PJG6 821 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 MBOAT1Q6ZNC8 495 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 PRR23BQ6ZRT6 265 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 ERMP1Q7Z2K6 904 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 NECAB2Q7Z6G3 386 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 ADGRG5Q8IZF4 528 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 PAF1Q8N7H5 531 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 PIP4K2CQ8TBX8 421 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 OTUB2Q96DC9 234 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 PPP3R2Q96LZ3 170 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 FAM83CQ9BQN1 747 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 APOL5Q9BWW9 433 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 SLC12A9Q9BXP2 914 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 SLC29A3Q9BZD2 475 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 SLAMF8Q9P0V8 285 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 TBC1D14Q9P2M4 693 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 PDE10AQ9Y233 779 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 HCFC2Q9Y5Z7 792 aa13.68□□□□□ -0.22
HOXC4-202ENST00000430889 LAMA2P24043 3122 aaKnown RBP13.68□□□□□ -0.22
HOXC4-202ENST00000430889 KIAA0100Q14667 2235 aaKnown RBP13.67□□□□□ -0.22
HOXC4-202ENST00000430889 LRRK1Q38SD2 2015 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 ATG2AQ2TAZ0 1938 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 KCNE1BA0A087WTH5 132 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 C15orf38-AP3S2A0A0A6YYH1 394 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 IFRD1O00458 451 aaPredicted RBP13.67□□□□□ -0.22
HOXC4-202ENST00000430889 KATNA1O75449 491 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 ARHGEF15O94989 841 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 ENO2P09104 434 aaPredicted RBP13.67□□□□□ -0.22
HOXC4-202ENST00000430889 MPC1LP0DKB6 136 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 HMOX2P30519 316 aa13.67□□□□□ -0.22
HOXC4-202ENST00000430889 VIPR1P32241 457 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms