RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 GOLGA6AQ9NYA3 693 aa9.92□□□□□ -0.82
ATG4B-212ENST00000430617 UBP1Q9NZI7 540 aa9.92□□□□□ -0.82
ATG4B-212ENST00000430617 PDP2Q9P2J9 529 aa9.92□□□□□ -0.82
ATG4B-212ENST00000430617 ST14Q9Y5Y6 855 aa9.92□□□□□ -0.82
ATG4B-212ENST00000430617 TEX264Q9Y6I9 313 aa9.92□□□□□ -0.82
ATG4B-212ENST00000430617 MAP1AP78559 2803 aaPredicted RBP9.92□□□□□ -0.82
ATG4B-212ENST00000430617 TTC24A2A3L6 582 aaPredicted RBP9.91□□□□□ -0.82
ATG4B-212ENST00000430617 PIPSLA2A3N6 862 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 A6NCN8 305 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 ANKUB1A6NFN9 424 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 PRSS44E7EML9 344 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 INSIG1O15503 277 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 RIPK2O43353 540 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 AVILO75366 819 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 PMPCBO75439 489 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 CREG1O75629 220 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 GSRP00390 522 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 PCCBP05166 539 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 ABHD2P08910 425 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 MAGEA4P43358 317 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 GPR3P46089 330 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 CSNK1DP48730 415 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 LMAN1P49257 510 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 AP1S1P61966 158 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 SLC20A2Q08357 652 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 NSUN2Q08J23 767 aaKnown RBP eCLIP9.91□□□□□ -0.82
ATG4B-212ENST00000430617 PDIA2Q13087 525 aaKnown RBP9.91□□□□□ -0.82
ATG4B-212ENST00000430617 ZRSR2Q15696 482 aaKnown RBP9.91□□□□□ -0.82
ATG4B-212ENST00000430617 BBS9Q3SYG4 887 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 DNAJC21Q5F1R6 531 aaKnown RBP9.91□□□□□ -0.82
ATG4B-212ENST00000430617 RANBP10Q6VN20 620 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 TRMT10CQ7L0Y3 403 aaKnown RBP9.91□□□□□ -0.82
ATG4B-212ENST00000430617 ARHGAP22Q7Z5H3 698 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 ZNF761Q86XN6 746 aaPredicted RBP9.91□□□□□ -0.82
ATG4B-212ENST00000430617 IGDCC3Q8IVU1 814 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 ZBED8Q8IZ13 594 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 PDIK1LQ8N165 341 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 MPP5Q8N3R9 675 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 RYBPQ8N488 228 aaPredicted RBP9.91□□□□□ -0.82
ATG4B-212ENST00000430617 RBMXL3Q8N7X1 1067 aaKnown RBP9.91□□□□□ -0.82
ATG4B-212ENST00000430617 OR56A4Q8NGH8 313 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 OR52K1Q8NGK4 314 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 ISG20Q96AZ6 181 aaKnown RBP9.91□□□□□ -0.82
ATG4B-212ENST00000430617 LRRC39Q96DD0 335 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 SIGLEC10Q96LC7 697 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 C9orf72Q96LT7 481 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 VIPAS39Q9H9C1 493 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 ARNT2Q9HBZ2 717 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 NOD2Q9HC29 1040 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 PHTF1Q9UMS5 762 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 PCDHGA9Q9Y5G4 932 aaKnown RBP9.91□□□□□ -0.82
ATG4B-212ENST00000430617 CACNA1CQ13936 2221 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 RTTNQ86VV8 2226 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 DOCK10Q96BY6 2186 aa9.91□□□□□ -0.82
ATG4B-212ENST00000430617 ACANP16112 2415 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 LOC285095A0A1B0GVY8 99 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 FZD6O60353 706 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 ZG16O60844 167 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 TTC4O95801 387 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 IGSF6O95976 241 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 FUCA1P04066 466 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 NUDT17P0C025 328 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 SPTBP11277 2137 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 CES1P23141 567 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 NFKBIAP25963 317 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 MGAT1P26572 445 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 AK4P27144 223 aaPredicted RBP9.9□□□□□ -0.82
ATG4B-212ENST00000430617 ELK3P41970 407 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 CHRNA4P43681 627 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 CCL11P51671 97 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 SARNPP82979 210 aaKnown RBP9.9□□□□□ -0.82
ATG4B-212ENST00000430617 ITKQ08881 620 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 CDH17Q12864 832 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 TRAF2Q12933 501 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 MSLNQ13421 630 aaPredicted RBP9.9□□□□□ -0.82
ATG4B-212ENST00000430617 MAP7Q14244 749 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 CCDC38Q502W7 563 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 ATXN7L2Q5T6C5 722 aaPredicted RBP9.9□□□□□ -0.82
ATG4B-212ENST00000430617 STEAP4Q687X5 459 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 LINC00523Q86TU6 105 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 NAGSQ8N159 534 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.9□□□□□ -0.82
ATG4B-212ENST00000430617 GALNT6Q8NCL4 622 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 FBXO36Q8NEA4 188 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 OR2AP1Q8NGE2 309 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 TTC25Q96NG3 672 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 APOL2Q9BQE5 337 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 ZPBPQ9BS86 351 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 LGR4Q9BXB1 951 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 FSD1LQ9BXM9 530 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 PIH1D1Q9NWS0 290 aaKnown RBP9.9□□□□□ -0.82
ATG4B-212ENST00000430617 SYBUQ9NX95 663 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 CHMP2BQ9UQN3 213 aa9.9□□□□□ -0.82
ATG4B-212ENST00000430617 AP3B1O00203 1094 aa9.89□□□□□ -0.83
ATG4B-212ENST00000430617 POLR1CO15160 346 aaPredicted RBP9.89□□□□□ -0.83
ATG4B-212ENST00000430617 INPP4BO15327 924 aa9.89□□□□□ -0.83
ATG4B-212ENST00000430617 LRRTM2O43300 516 aa9.89□□□□□ -0.83
ATG4B-212ENST00000430617 ATP8B1O43520 1251 aa9.89□□□□□ -0.83
ATG4B-212ENST00000430617 AGTP01019 485 aa9.89□□□□□ -0.83
ATG4B-212ENST00000430617 PRLP01236 227 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms