RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 A8MU76 341 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 NUDT17P0C025 328 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 SYN1P17600 705 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 CSKP41240 450 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 C1QTNF8P60827 252 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 VBP1P61758 197 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 DLG1Q12959 904 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 CERS6Q6ZMG9 384 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 RASGEF1AQ8N9B8 481 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 AUTS2Q8WXX7 1259 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 SLC35G5Q96KT7 338 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 RBM4BQ9BQ04 359 aaKnown RBP15.19■□□□□ 0.02
PTPRF-206ENST00000429895 RBM4Q9BWF3 364 aaKnown RBP15.19■□□□□ 0.02
PTPRF-206ENST00000429895 TBC1D17Q9HA65 648 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 MYBPHLA2RUH7 354 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 MATN3O15232 486 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 NME6O75414 186 aaPredicted RBP15.19■□□□□ 0.02
PTPRF-206ENST00000429895 PBX3P40426 434 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 TXNL4AP83876 142 aaKnown RBP15.19■□□□□ 0.02
PTPRF-206ENST00000429895 TSTD1Q8NFU3 115 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 COMMD4Q9H0A8 199 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 CLDND1Q9NY35 253 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 A0A1W2PRU2 124 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 EDF1O60869 148 aaKnown RBP15.19■□□□□ 0.02
PTPRF-206ENST00000429895 IL7RP16871 459 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 BMP6P22004 513 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 NR4A1P22736 598 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 MMP8P22894 467 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 DEFB119Q8N690 84 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 OR4C6Q8NH72 309 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 YIPF4Q9BSR8 244 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 IFT27Q9BW83 186 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 ELAC1Q9H777 363 aaKnown RBP15.19■□□□□ 0.02
PTPRF-206ENST00000429895 CCNB2O95067 398 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 LDOC1O95751 146 aaPredicted RBP15.19■□□□□ 0.02
PTPRF-206ENST00000429895 STATHP02808 62 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 P4HA3Q7Z4N8 544 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 HPS1Q92902 700 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 SNX27Q96L92 541 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 AGAP2Q99490 1192 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 TBX5Q99593 518 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 SLC25A51Q9H1U9 297 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 MAGEH1Q9H213 219 aa15.19■□□□□ 0.02
PTPRF-206ENST00000429895 ARHGAP23Q9P227 1491 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 TSPAN5P62079 268 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 FASTKD3Q14CZ7 662 aaKnown RBP15.18■□□□□ 0.02
PTPRF-206ENST00000429895 PHF19Q5T6S3 580 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 PPP1R11O60927 126 aaPredicted RBP15.18■□□□□ 0.02
PTPRF-206ENST00000429895 SEPHS1P49903 392 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 YBEYP58557 167 aaPredicted RBP15.18■□□□□ 0.02
PTPRF-206ENST00000429895 TAS2R50P59544 299 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 HYAL2Q12891 473 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 NFATC2Q13469 925 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 TOR1AIP1Q5JTV8 583 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 PTF1AQ7RTS3 328 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 LPGAT1Q92604 370 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 DNAJC28Q9NX36 388 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 WNT7AO00755 349 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 DHFRP00374 187 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 MLLT3P42568 568 aaPredicted RBP15.18■□□□□ 0.02
PTPRF-206ENST00000429895 KCNJ5P48544 419 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 NCBP2P52298 156 aaKnown RBP eCLIP15.18■□□□□ 0.02
PTPRF-206ENST00000429895 OLR1P78380 273 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 CHAF1BQ13112 559 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 DPYSQ14117 519 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 PCBP2Q15366 365 aaKnown RBP eCLIP15.18■□□□□ 0.029e-9■■■■■ 31
PTPRF-206ENST00000429895 ZNF613Q6PF04 617 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 ARL10Q8N8L6 244 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 C11orf65Q8NCR3 313 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 NUS1Q96E22 293 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 PIWIL1Q96J94 861 aaKnown RBP15.18■□□□□ 0.02
PTPRF-206ENST00000429895 BAZ2BQ9UIF8 2168 aaKnown RBP15.18■□□□□ 0.02
PTPRF-206ENST00000429895 TCRBV7S2A1N4TA0A589 114 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 TLX3O43711 291 aaPredicted RBP15.18■□□□□ 0.02
PTPRF-206ENST00000429895 LRCH4O75427 683 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 PAPSS2O95340 614 aaPredicted RBP15.18■□□□□ 0.02
PTPRF-206ENST00000429895 TGDSO95455 350 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 TSTD2Q5T7W7 516 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 MON1BQ7L1V2 547 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 PQLC1Q8N2U9 271 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 OR10A6Q8NH74 314 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 DNAAF2Q9NVR5 837 aaKnown RBP15.18■□□□□ 0.02
PTPRF-206ENST00000429895 STXBP5LQ9Y2K9 1186 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 LMTK2Q8IWU2 1503 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 FAM240BA0A1B0GVZ2 78 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 MAGEB17A8MXT2 336 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 PIP5K1BO14986 540 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 AXIN1O15169 862 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 PDPK1O15530 556 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 CARTPTQ16568 116 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 ARSIQ5FYB1 569 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 TATDN1Q6P1N9 297 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 GAL3ST3Q96A11 431 aa15.18■□□□□ 0.02
PTPRF-206ENST00000429895 TRMT61BQ9BVS5 477 aaKnown RBP15.18■□□□□ 0.02
PTPRF-206ENST00000429895 RCOR3Q9P2K3 495 aaPredicted RBP15.18■□□□□ 0.02
PTPRF-206ENST00000429895 MST1RQ04912 1400 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 TTC24A2A3L6 582 aaPredicted RBP15.17■□□□□ 0.02
PTPRF-206ENST00000429895 KMOO15229 486 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 FUT4P22083 530 aa15.17■□□□□ 0.02
PTPRF-206ENST00000429895 ANKRD22Q5VYY1 191 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms