RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 WDR12Q9GZL7 423 aaKnown RBP13.54□□□□□ -0.24
SGMS1-203ENST00000429490 DNAJB9Q9UBS3 223 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 CNTRLQ7Z7A1 2325 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 EPB42P16452 691 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 GNPDA1P46926 289 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 CD47Q08722 323 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 EPS8Q12929 822 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 DUSP4Q13115 394 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 CDH18Q13634 790 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 MS4A13Q5J8X5 152 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 UBXN11Q5T124 520 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 SMYD5Q6GMV2 418 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 KRTCAP2Q8N6L1 136 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 EBPLQ9BY08 206 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 TPK1Q9H3S4 243 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 TUBB1Q9H4B7 451 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 PRDM5Q9NQX1 630 aaPredicted RBP13.54□□□□□ -0.24
SGMS1-203ENST00000429490 TBCCD1Q9NVR7 557 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 GNPTGQ9UJJ9 305 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 ZNF510Q9Y2H8 683 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 CORINQ9Y5Q5 1042 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 ITGALP20701 1170 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 RPL9P32969 192 aaKnown RBP13.54□□□□□ -0.24
SGMS1-203ENST00000429490 NUDT6P53370 316 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 NCS1P62166 190 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 SEMA3BQ13214 749 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 TUSC3Q13454 348 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 SKIV2LQ15477 1246 aaKnown RBP13.54□□□□□ -0.24
SGMS1-203ENST00000429490 ZNF792Q3KQV3 632 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 ARMC12Q5T9G4 340 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 MFSD2AQ8NA29 543 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 PIK3C3Q8NEB9 887 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 LRTM1Q9HBL6 345 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 TRMT13Q9NUP7 481 aaKnown RBP13.54□□□□□ -0.24
SGMS1-203ENST00000429490 AIG1Q9NVV5 245 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 SPASTQ9UBP0 616 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 GNG14A0A1W2PPG7 69 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 BCAS1O75363 584 aaPredicted RBP13.53□□□□□ -0.24
SGMS1-203ENST00000429490 TULP3O75386 442 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 SLC25A14O95258 325 aaPredicted RBP13.53□□□□□ -0.24
SGMS1-203ENST00000429490 POU2F1P14859 743 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 DEFA1P59665 94 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 DEFA3P59666 94 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 RFTN2Q52LD8 501 aaPredicted RBP13.53□□□□□ -0.24
SGMS1-203ENST00000429490 C9orf131Q5VYM1 1079 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 TXNDC11Q6PKC3 985 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 GATAD2AQ86YP4 633 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 RSPH1Q8WYR4 309 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 PPP1R14BQ96C90 147 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 UBXN10Q96LJ8 280 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 ZNF556Q9HAH1 456 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 PRDM8Q9NQV8 689 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 POLR3BQ9NW08 1133 aaPredicted RBP13.53□□□□□ -0.24
SGMS1-203ENST00000429490 TMEM161AQ9NX61 479 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 FAM32AQ9Y421 112 aaKnown RBP13.53□□□□□ -0.24
SGMS1-203ENST00000429490 TNPO3Q9Y5L0 923 aaKnown RBP13.53□□□□□ -0.24
SGMS1-203ENST00000429490 UBR3Q6ZT12 1888 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 PRMT5O14744 637 aaPredicted RBP13.53□□□□□ -0.24
SGMS1-203ENST00000429490 ENO2P09104 434 aaPredicted RBP13.53□□□□□ -0.24
SGMS1-203ENST00000429490 SOAT1P35610 550 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 FAM189BP81408 668 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 ADAMTSL2Q86TH1 951 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 ERVK-18Q9QC07 812 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 OAS3Q9Y6K5 1087 aaKnown RBP13.53□□□□□ -0.24
SGMS1-203ENST00000429490 SYNDIG1LA6NDD5 238 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 LSM1O15116 133 aaKnown RBP13.53□□□□□ -0.24
SGMS1-203ENST00000429490 CHRM5P08912 532 aaPredicted RBP13.53□□□□□ -0.24
SGMS1-203ENST00000429490 CD36P16671 472 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 INPP1P49441 399 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 SPCS2Q15005 226 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 PCBP1Q15365 356 aaKnown RBP eCLIP13.53□□□□□ -0.24
SGMS1-203ENST00000429490 RNF219Q5W0B1 726 aaPredicted RBP13.53□□□□□ -0.24
SGMS1-203ENST00000429490 PSAPL1Q6NUJ1 521 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 DOK6Q6PKX4 331 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 Q6ZNX1 250 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 SYT12Q8IV01 421 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 CNTN4Q8IWV2 1026 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 SVOPQ8N4V2 548 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 CHCHD6Q9BRQ6 235 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 CCSER2Q9H7U1 834 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 VAPAQ9P0L0 249 aa13.53□□□□□ -0.24
SGMS1-203ENST00000429490 PSMD11O00231 422 aa13.52□□□□□ -0.24
SGMS1-203ENST00000429490 RGS10O43665 173 aa13.52□□□□□ -0.24
SGMS1-203ENST00000429490 ITPKAP23677 461 aa13.52□□□□□ -0.24
SGMS1-203ENST00000429490 AZGP1P25311 298 aaKnown RBP13.52□□□□□ -0.24
SGMS1-203ENST00000429490 PRIM2P49643 509 aa13.52□□□□□ -0.24
SGMS1-203ENST00000429490 SEMA3AQ14563 771 aa13.52□□□□□ -0.24
SGMS1-203ENST00000429490 SPANXN2Q5MJ10 180 aa13.52□□□□□ -0.24
SGMS1-203ENST00000429490 AGMOQ6ZNB7 445 aa13.52□□□□□ -0.24
SGMS1-203ENST00000429490 HIPK1Q86Z02 1210 aa13.52□□□□□ -0.24
SGMS1-203ENST00000429490 FAM86B1Q8N7N1 296 aa13.52□□□□□ -0.24
SGMS1-203ENST00000429490 HEPHQ9BQS7 1158 aa13.52□□□□□ -0.24
SGMS1-203ENST00000429490 NUAK2Q9H093 628 aa13.52□□□□□ -0.24
SGMS1-203ENST00000429490 ATG10Q9H0Y0 220 aa13.52□□□□□ -0.24
SGMS1-203ENST00000429490 SMOC2Q9H3U7 446 aa13.52□□□□□ -0.24
SGMS1-203ENST00000429490 MAGEE1Q9HCI5 957 aa13.52□□□□□ -0.24
SGMS1-203ENST00000429490 FAM118AQ9NWS6 357 aa13.52□□□□□ -0.24
SGMS1-203ENST00000429490 IKZF3Q9UKT9 509 aa13.52□□□□□ -0.24
SGMS1-203ENST00000429490 GIT1Q9Y2X7 761 aa13.52□□□□□ -0.24
SGMS1-203ENST00000429490 PNMA8CA0A1B0GUJ8 204 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms