RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 LCP2Q13094 533 aa16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 TMEM126BQ8IUX1 230 aa16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 OR52L1Q8NGH7 329 aa16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 GPR34Q9UPC5 381 aa16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 H0YGN5 161 aa16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 TOP3BO95985 862 aaKnown RBP16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 TNFRSF8P28908 595 aa16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 IL12BP29460 328 aa16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 TNK2Q07912 1038 aa16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 C16orf87Q6PH81 154 aa16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 TWIST2Q8WVJ9 160 aa16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 PTPRZ1P23471 2315 aaPredicted RBP16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 SNUPNO95149 360 aaKnown RBP16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 BPGMP07738 259 aa16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 NCF4Q15080 339 aa16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 C19orf60Q96EN9 201 aa16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 HSD3B7Q9H2F3 369 aa16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 MUSKO15146 869 aa16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 POLR2CP19387 275 aaPredicted RBP16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 TMEM115Q12893 351 aaPredicted RBP16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 DRICH1Q6PGQ1 229 aaPredicted RBP16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 ZNF783Q6ZMS7 281 aa16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 SMPDL3BQ92485 455 aa16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 OR2M4Q96R27 311 aa16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 SERTAD3Q9UJW9 196 aa16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 COPG1Q9Y678 874 aaKnown RBP16.82■□□□□ 0.28
SMARCA4-203ENST00000429416 NQO1P15559 274 aaKnown RBP16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 CRHR1P34998 444 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 PREPP48147 710 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 IL23RQ5VWK5 629 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 ZMIZ2Q8NF64 920 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 SLC35B2Q8TB61 432 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 SLC2A13Q96QE2 648 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 C12orf65Q9H3J6 166 aaKnown RBP16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 SLCO1B3Q9NPD5 702 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 C2orf71A6NGG8 1288 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 A8MUI8 341 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 NDUFS4O43181 175 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 UBXN7O94888 489 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 PGLSO95336 258 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 SEC24AO95486 1093 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 SOX9P48436 509 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 HEPACAMQ14CZ8 416 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 HRASLS2Q9NWW9 162 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 SLC17A6Q9P2U8 582 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 MYH14Q7Z406 1995 aaKnown RBP16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 SLBPQ14493 270 aaKnown RBP eCLIP16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 LRIG1Q96JA1 1093 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 FNDC11Q9BVV2 318 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 SRPRAP08240 638 aaKnown RBP16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 CASRP41180 1078 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 RPL26P61254 145 aaKnown RBP16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 CADM2Q8N3J6 435 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 ZNF276Q8N554 614 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 DNAJC9Q8WXX5 260 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 FIZ1Q96SL8 496 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 MYLK2Q9H1R3 596 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 MTG2Q9H4K7 406 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 IL21RQ9HBE5 538 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 RPS6KA6Q9UK32 745 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 RPL26L1Q9UNX3 145 aaKnown RBP16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 PLLPQ9Y342 182 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 MAP4K5Q9Y4K4 846 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 ZBTB22O15209 634 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 ADAM12O43184 909 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 SOCS5O75159 536 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 PDE9AO76083 593 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 EFNA1P20827 205 aaPredicted RBP16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 CDH5P33151 784 aaPredicted RBP16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 SERPINB10P48595 397 aa16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.81■□□□□ 0.28
SMARCA4-203ENST00000429416 ATP6V1B1P15313 513 aa16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 GLDCP23378 1020 aa16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 HNF1BP35680 557 aa16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 BNC1Q01954 994 aa16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 USP53Q70EK8 1073 aa16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 SMPDL3AQ92484 453 aa16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 CNOT6Q9ULM6 557 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 ZNF24P17028 368 aa16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 FSTL5Q8N475 847 aaPredicted RBP16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 DDX1Q92499 740 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 GRIP2Q9C0E4 1043 aa16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 CCDC159P0C7I6 412 aa16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 TTMPQ5BVD1 217 aa16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 EPHX4Q8IUS5 362 aa16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 UBR7Q8N806 425 aa16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 PHF10Q8WUB8 498 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 TSACCQ96A04 125 aaPredicted RBP16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 FTSJ1Q9UET6 329 aa16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 M0R3G1 203 aa16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 ERI3O43414 337 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 CNOT3O75175 753 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 TGFB1P01137 390 aa16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 CCND1P24385 295 aa16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 UBAP2LQ14157 1087 aaKnown RBP16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 ABHD13Q7L211 337 aa16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 RNF31Q96EP0 1072 aa16.8■□□□□ 0.28
SMARCA4-203ENST00000429416 BMP7P18075 431 aa16.79■□□□□ 0.28
SMARCA4-203ENST00000429416 C5AR1P21730 350 aa16.79■□□□□ 0.28
SMARCA4-203ENST00000429416 VPS26BQ4G0F5 336 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms