RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 LACRTQ9GZZ8 138 aa11.04□□□□□ -0.64
NDUFA3-208ENST00000422029 RAB33BQ9H082 229 aa11.04□□□□□ -0.64
NDUFA3-208ENST00000422029 KCND1Q9NSA2 647 aa11.04□□□□□ -0.64
NDUFA3-208ENST00000422029 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.04□□□□□ -0.644e-11■□□□□ 10.9
NDUFA3-208ENST00000422029 ANAPC2Q9UJX6 822 aa11.04□□□□□ -0.64
NDUFA3-208ENST00000422029 KCND3Q9UK17 655 aa11.04□□□□□ -0.64
NDUFA3-208ENST00000422029 REXO2Q9Y3B8 237 aaKnown RBP11.04□□□□□ -0.64
NDUFA3-208ENST00000422029 NBASA2RRP1 2371 aa11.04□□□□□ -0.64
NDUFA3-208ENST00000422029 TCRBV7S2A1N4TA0A589 114 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 TLCD2A6NGC4 264 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 APOC4-APOC2K7ER74 178 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 MASP2O00187 686 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 KCNJ13O60928 360 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 RFPL1O75677 317 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 METTL18O95568 372 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 APOC2P02655 101 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 CTSBP07858 339 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 ST6GAL1P15907 406 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 CDH3P22223 829 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 PTPN4P29074 926 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 MC4RP32245 332 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 CSE1LP55060 971 aaKnown RBP11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 HADHBP55084 474 aaKnown RBP11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 KLRB1Q12918 225 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 ABRQ12979 859 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 MSLNQ13421 630 aaPredicted RBP11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 POU6F1Q14863 301 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 NADK2Q4G0N4 442 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 CAPRIN2Q6IMN6 1127 aaKnown RBP11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 C11orf63Q6NUN7 778 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 RAD9BQ6WBX8 426 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 GAS2L3Q86XJ1 694 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 CDKL3Q8IVW4 592 aaPredicted RBP11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 NXPE1Q8N323 547 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 FAM71DQ8N9W8 422 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 OR1L3Q8NH93 324 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 ZNF501Q96CX3 271 aaPredicted RBP11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 CLIP3Q96DZ5 547 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 SRMSQ9H3Y6 488 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 KIR3DX1Q9H7L2 352 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 ANKMY1Q9P2S6 941 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 CIDEBQ9UHD4 219 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 ACSL5Q9ULC5 683 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 PLAGL1Q9UM63 463 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 FARSAQ9Y285 508 aaKnown RBP11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 R3HDM2Q9Y2K5 976 aaKnown RBP11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 PCDHA3Q9Y5H8 950 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 EPN1Q9Y6I3 576 aaPredicted RBP11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 DNMT3AQ9Y6K1 912 aaPredicted RBP11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 PRSS21Q9Y6M0 314 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 DOPEY2Q9Y3R5 2298 aa11.03□□□□□ -0.64
NDUFA3-208ENST00000422029 SPTBP11277 2137 aa11.02□□□□□ -0.64
NDUFA3-208ENST00000422029 C5orf60A6NFR6 353 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 TTLL8A6PVC2 850 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 TMEM150CB9EJG8 249 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 BTN3A1O00481 513 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 ZNF185O15231 689 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 PJA2O43164 708 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 HCRTR1O43613 425 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 LDB2O43679 373 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 ZBTB11O95625 1053 aaPredicted RBP11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 FTCDO95954 541 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 PTMAP06454 111 aaKnown RBP11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 ATP1B2P14415 290 aaPredicted RBP11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 ITGALP20701 1170 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 CTNNA1P35221 906 aaKnown RBP11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 PTGIRP43119 386 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 ZNF140P52738 457 aaPredicted RBP11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 PMS2P54278 862 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 RPS15P62841 145 aaKnown RBP11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 TUBB4BP68371 445 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 PDE1BQ01064 536 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 TUBB2AQ13885 445 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 SLC9A5Q14940 896 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 DEFB110Q30KQ9 67 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 CCDC38Q502W7 563 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 PRR30Q53SZ7 412 aaPredicted RBP11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 PLEKHS1Q5SXH7 462 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 C1orf189Q5VU69 101 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 PRUNE1Q86TP1 453 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 SERPINA9Q86WD7 417 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 FAM20CQ8IXL6 584 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 D2HGDHQ8N465 521 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 ENDOVQ8N8Q3 282 aaKnown RBP11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 SPATA13Q96N96 652 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 COPS8Q99627 209 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 TUBB2BQ9BVA1 445 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 RBSNQ9H1K0 784 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 SMOXQ9NWM0 555 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 SMARCAL1Q9NZC9 954 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 SEMA5BQ9P283 1151 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 MAP10Q9P2G4 905 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 AAR2Q9Y312 384 aaKnown RBP11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 COLEC10Q9Y6Z7 277 aa11.02□□□□□ -0.65
NDUFA3-208ENST00000422029 BLACEA4D250 179 aa11.01□□□□□ -0.65
NDUFA3-208ENST00000422029 GRID2IPA4D2P6 1211 aa11.01□□□□□ -0.65
NDUFA3-208ENST00000422029 GOLGA6L3A6NEY3 463 aa11.01□□□□□ -0.65
NDUFA3-208ENST00000422029 CPNE3O75131 537 aaKnown RBP11.01□□□□□ -0.65
NDUFA3-208ENST00000422029 STK10O94804 968 aaKnown RBP11.01□□□□□ -0.65
NDUFA3-208ENST00000422029 CRTAMO95727 393 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms