RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 CAPRIN2Q6IMN6 1127 aaKnown RBP15.4■□□□□ 0.06
BRAT1-202ENST00000421712 DUS1LQ6P1R4 473 aaKnown RBP15.4■□□□□ 0.06
BRAT1-202ENST00000421712 CCNI2Q6ZMN8 369 aaPredicted RBP15.4■□□□□ 0.06
BRAT1-202ENST00000421712 OTOAQ7RTW8 1153 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 RBM12BQ8IXT5 1001 aaKnown RBP15.4■□□□□ 0.06
BRAT1-202ENST00000421712 DCBLD1Q8N8Z6 715 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 PHC3Q8NDX5 983 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 LKAAEAR1Q8TD35 194 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 ASZ1Q8WWH4 475 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 NCSTNQ92542 709 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 FAM136AQ96C01 138 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 RMDN2Q96LZ7 410 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 WDR83Q9BRX9 315 aaKnown RBP15.4■□□□□ 0.06
BRAT1-202ENST00000421712 FOXP3Q9BZS1 431 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 DMGDHQ9UI17 866 aaKnown RBP15.4■□□□□ 0.06
BRAT1-202ENST00000421712 WASF3Q9UPY6 502 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 MSRB2Q9Y3D2 182 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 CACNA1AO00555 2505 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 D6RAR5 112 aa15.39■□□□□ 0.05
BRAT1-202ENST00000421712 AGRPO00253 132 aa15.39■□□□□ 0.05
BRAT1-202ENST00000421712 NIPSNAP2O75323 286 aa15.39■□□□□ 0.05
BRAT1-202ENST00000421712 HAUS5O94927 633 aa15.39■□□□□ 0.05
BRAT1-202ENST00000421712 CPNE6O95741 557 aa15.39■□□□□ 0.05
BRAT1-202ENST00000421712 CD1CP29017 333 aa15.39■□□□□ 0.05
BRAT1-202ENST00000421712 CD151P48509 253 aa15.39■□□□□ 0.05
BRAT1-202ENST00000421712 GPR18Q14330 331 aa15.39■□□□□ 0.05
BRAT1-202ENST00000421712 ISXQ2M1V0 245 aa15.39■□□□□ 0.05
BRAT1-202ENST00000421712 CTSL3PQ5NE16 218 aa15.39■□□□□ 0.05
BRAT1-202ENST00000421712 PHF19Q5T6S3 580 aa15.39■□□□□ 0.05
BRAT1-202ENST00000421712 STEAP4Q687X5 459 aa15.39■□□□□ 0.05
BRAT1-202ENST00000421712 TRMT10BQ6PF06 316 aaKnown RBP15.39■□□□□ 0.05
BRAT1-202ENST00000421712 ZDHHC24Q6UX98 284 aa15.39■□□□□ 0.05
BRAT1-202ENST00000421712 SKA2Q8WVK7 121 aaPredicted RBP15.39■□□□□ 0.05
BRAT1-202ENST00000421712 JPH3Q8WXH2 748 aaPredicted RBP15.39■□□□□ 0.05
BRAT1-202ENST00000421712 TFGQ92734 400 aaPredicted RBP15.39■□□□□ 0.05
BRAT1-202ENST00000421712 TMEM74Q96NL1 305 aa15.39■□□□□ 0.05
BRAT1-202ENST00000421712 BIRC8Q96P09 236 aa15.39■□□□□ 0.05
BRAT1-202ENST00000421712 OR52A5Q9H2C5 316 aa15.39■□□□□ 0.05
BRAT1-202ENST00000421712 UCK1Q9HA47 277 aa15.39■□□□□ 0.05
BRAT1-202ENST00000421712 MTRF1LQ9UGC7 380 aaKnown RBP15.39■□□□□ 0.05
BRAT1-202ENST00000421712 SLC5A10A0PJK1 596 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 LILRA5A6NI73 299 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 ESPNB1AK53 854 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 TMX2-CTNND1H3BSU7 103 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 ZNF500O60304 480 aaPredicted RBP15.38■□□□□ 0.05
BRAT1-202ENST00000421712 UBXN7O94888 489 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 PROS1P07225 676 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 RHOXF2BP0C7M4 288 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 AOAHP28039 575 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 NDUFS1P28331 727 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 MAGEA4P43358 317 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 EPHA4P54764 986 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 INHBCP55103 352 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 ADARP55265 1226 aaKnown RBP15.38■□□□□ 0.05
BRAT1-202ENST00000421712 MGAT5Q09328 741 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 ABRQ12979 859 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 ZNF658BQ4V348 819 aaPredicted RBP15.38■□□□□ 0.05
BRAT1-202ENST00000421712 SNAP47Q5SQN1 464 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 TEDDM1Q5T9Z0 273 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 FOXR1Q6PIV2 292 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 CNSTQ6PJW8 725 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 XKR5Q6UX68 686 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 C3orf62Q6ZUJ4 267 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 PDZD3Q86UT5 571 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 CACTIN-AS1Q8N1I8 211 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 C2CD4AQ8NCU7 369 aaPredicted RBP15.38■□□□□ 0.05
BRAT1-202ENST00000421712 CFAP61Q8NHU2 1237 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 ATXN7L3BQ96GX2 97 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 C9orf72Q96LT7 481 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 RHOXF2Q9BQY4 288 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 NUDT22Q9BRQ3 303 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 STRADBQ9C0K7 418 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 ZFATQ9P243 1243 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 TSR3Q9UJK0 312 aaKnown RBP15.38■□□□□ 0.05
BRAT1-202ENST00000421712 ASF1AQ9Y294 204 aa15.38■□□□□ 0.05
BRAT1-202ENST00000421712 FAM221BA6H8Z2 402 aa15.37■□□□□ 0.05
BRAT1-202ENST00000421712 HOXB3P14651 431 aaPredicted RBP15.37■□□□□ 0.05
BRAT1-202ENST00000421712 MPSTP25325 297 aa15.37■□□□□ 0.05
BRAT1-202ENST00000421712 SSTR1P30872 391 aa15.37■□□□□ 0.05
BRAT1-202ENST00000421712 LEPRP48357 1165 aaKnown RBP15.37■□□□□ 0.05
BRAT1-202ENST00000421712 PRKG2Q13237 762 aa15.37■□□□□ 0.05
BRAT1-202ENST00000421712 CLPPQ16740 277 aaPredicted RBP15.37■□□□□ 0.05
BRAT1-202ENST00000421712 KIAA0408Q6ZU52 694 aa15.37■□□□□ 0.05
BRAT1-202ENST00000421712 B3GNT8Q7Z7M8 397 aa15.37■□□□□ 0.05
BRAT1-202ENST00000421712 ZFPM2Q8WW38 1151 aa15.37■□□□□ 0.05
BRAT1-202ENST00000421712 SEC14L1Q92503 715 aa15.37■□□□□ 0.05
BRAT1-202ENST00000421712 DPYSL5Q9BPU6 564 aa15.37■□□□□ 0.05
BRAT1-202ENST00000421712 SEMA6CQ9H3T2 930 aa15.37■□□□□ 0.05
BRAT1-202ENST00000421712 EPB41L1Q9H4G0 881 aa15.37■□□□□ 0.05
BRAT1-202ENST00000421712 MVB12BQ9H7P6 319 aa15.37■□□□□ 0.05
BRAT1-202ENST00000421712 PLAC1Q9HBJ0 212 aa15.37■□□□□ 0.05
BRAT1-202ENST00000421712 SLC17A6Q9P2U8 582 aa15.37■□□□□ 0.05
BRAT1-202ENST00000421712 KLHL3Q9UH77 587 aa15.37■□□□□ 0.05
BRAT1-202ENST00000421712 TDRKHQ9Y2W6 561 aaKnown RBP15.37■□□□□ 0.05
BRAT1-202ENST00000421712 ENTPD2Q9Y5L3 495 aa15.37■□□□□ 0.05
BRAT1-202ENST00000421712 COMMD10Q9Y6G5 202 aa15.37■□□□□ 0.05
BRAT1-202ENST00000421712 AK5Q9Y6K8 562 aa15.37■□□□□ 0.05
BRAT1-202ENST00000421712 TRABD2BA6NFA1 517 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 A8MU76 341 aa15.36■□□□□ 0.05
BRAT1-202ENST00000421712 BHMG1C9JSJ3 638 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms