RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 H2AFXP16104 143 aaPredicted RBP8.29□□□□□ -1.08
TRIM48-201ENST00000417545 FDXRP22570 491 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 MAP4P27816 1152 aaKnown RBP8.29□□□□□ -1.08
TRIM48-201ENST00000417545 AOAHP28039 575 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 RPIAP49247 311 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 CDKN2DP55273 166 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 TAS2R39P59534 338 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 DMPKQ09013 629 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 RPA4Q13156 261 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 ZNF460Q14592 562 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 KCTD16Q68DU8 428 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 ZNF549Q6P9A3 640 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 CCDC91Q7Z6B0 441 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 CMC1Q7Z7K0 106 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 SLC9B2Q86UD5 537 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 RAB42Q8N4Z0 105 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 GPBAR1Q8TDU6 330 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 SCYL1Q96KG9 808 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 FERD3LQ96RJ6 166 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 TRIM54Q9BYV2 358 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 EPB41L4BQ9H329 900 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 PCMTD2Q9NV79 361 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 UCKL1Q9NWZ5 548 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 NLGN3Q9NZ94 848 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 CTNNAL1Q9UBT7 734 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 SLC23A2Q9UGH3 650 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 KLF15Q9UIH9 416 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 ASF1AQ9Y294 204 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 ACOT9Q9Y305 439 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 DHRS7Q9Y394 339 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 GON4LQ3T8J9 2241 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 A0A096LPK6 155 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 KIR2DS5A0A0G2JLQ3 304 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 A0A0G2JNG1 304 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 RHPN2P1A8MT19 583 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 PROB1E7EW31 1015 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 KIR2DS3K7RE56 304 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 EIF3FO00303 357 aaPredicted RBP8.29□□□□□ -1.08
TRIM48-201ENST00000417545 YY2O15391 372 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 FLRT2O43155 660 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 ZW10O43264 779 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 SGTAO43765 313 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 OPA1O60313 960 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 GFRA3O60609 400 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 SYF2O95926 243 aaKnown RBP8.29□□□□□ -1.08
TRIM48-201ENST00000417545 CATP04040 527 aaKnown RBP8.29□□□□□ -1.08
TRIM48-201ENST00000417545 FUCA1P04066 466 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 S100BP04271 92 aaPredicted RBP8.29□□□□□ -1.08
TRIM48-201ENST00000417545 CELA2BP08218 269 aaPredicted RBP8.29□□□□□ -1.08
TRIM48-201ENST00000417545 HIST1H2AGP0C0S8 130 aaPredicted RBP8.29□□□□□ -1.08
TRIM48-201ENST00000417545 ZNF883P0CG24 379 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 CCDC166P0CW27 439 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 MPC1LP0DKB6 136 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 F3P13726 295 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 HIST1H2ADP20671 130 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 CYP2A7P20853 494 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 GRK6P43250 576 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 CLCN7P51798 805 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 ZNF844Q08AG5 666 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 ABRQ12979 859 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 DNAJC3Q13217 504 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 GPS2Q13227 327 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 CSHL1Q14406 222 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 KIR2DS5Q14953 304 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 PLCL1Q15111 1095 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 FAM83EQ2M2I3 478 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 C6orf132Q5T0Z8 1188 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 AGAP9Q5VTM2 703 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 METRNLQ641Q3 311 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 ZCCHC8Q6NZY4 707 aaKnown RBP8.29□□□□□ -1.08
TRIM48-201ENST00000417545 LVRNQ6Q4G3 990 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 PAQR3Q6TCH7 311 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 FAM83HQ6ZRV2 1179 aaPredicted RBP8.29□□□□□ -1.08
TRIM48-201ENST00000417545 C11orf96Q7Z7L8 435 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 PDZD3Q86UT5 571 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 TDRPQ86YL5 185 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 EID2Q8N6I1 236 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 CD200R1Q8TD46 325 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 MAGEC3Q8TD91 643 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 ZBTB9Q96C00 473 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 HIST1H2AHQ96KK5 128 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 SMC6Q96SB8 1091 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 OLFM1Q99784 485 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 HIST1H2AJQ99878 128 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 H2AFJQ9BTM1 129 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 TRIT1Q9H3H1 467 aaKnown RBP8.29□□□□□ -1.08
TRIM48-201ENST00000417545 SYNDIG1Q9H7V2 258 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 PRDM8Q9NQV8 689 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 NCKIPSDQ9NZQ3 722 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 KLHL42Q9P2K6 505 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 TBC1D29Q9UFV1 150 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 PNMA8BQ9ULN7 279 aaPredicted RBP8.29□□□□□ -1.08
TRIM48-201ENST00000417545 TDRKHQ9Y2W6 561 aaKnown RBP8.29□□□□□ -1.08
TRIM48-201ENST00000417545 PCYT1BQ9Y5K3 369 aaPredicted RBP8.29□□□□□ -1.08
TRIM48-201ENST00000417545 CFAP20Q9Y6A4 193 aaKnown RBP8.29□□□□□ -1.08
TRIM48-201ENST00000417545 COLEC10Q9Y6Z7 277 aa8.29□□□□□ -1.08
TRIM48-201ENST00000417545 SLC5A10A0PJK1 596 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 GOLGA8RI6L899 631 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 BTN3A1O00481 513 aa8.28□□□□□ -1.08
TRIM48-201ENST00000417545 DYNC1I1O14576 645 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms