RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 ZFP28Q8NHY6 868 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 CSGALNACT1Q8TDX6 532 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 ZUFSPQ96AP4 578 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 ULK4Q96C45 1275 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 PPP1R16AQ96I34 528 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 BIRC8Q96P09 236 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 GPR78Q96P69 363 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 HOPXQ9BPY8 73 aaPredicted RBP11.4□□□□□ -0.58
RFFL-205ENST00000415395 SYTL2Q9HCH5 934 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 IL26Q9NPH9 171 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 TRPV5Q9NQA5 729 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 PACSIN3Q9UKS6 424 aa11.4□□□□□ -0.58
RFFL-205ENST00000415395 PLXNB3Q9ULL4 1909 aa11.4□□□□□ -0.59
RFFL-205ENST00000415395 COL4A2P08572 1712 aa11.4□□□□□ -0.59
RFFL-205ENST00000415395 CKAP5Q14008 2032 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 REV3LO60673 3130 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 A0A087WXM4 84 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 UBA6A0AVT1 1052 aaPredicted RBP11.39□□□□□ -0.59
RFFL-205ENST00000415395 H0Y858 1186 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 H3BMM5 538 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 ZNF701M0R085 212 aaPredicted RBP11.39□□□□□ -0.59
RFFL-205ENST00000415395 PRMT5O14744 637 aaPredicted RBP11.39□□□□□ -0.59
RFFL-205ENST00000415395 HNRNPRO43390 633 aaKnown RBP11.39□□□□□ -0.59
RFFL-205ENST00000415395 NRP2O60462 931 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 VPS26AO75436 327 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 BMP10O95393 424 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 FCGR1AP12314 374 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 PKMP14618 531 aaKnown RBP11.39□□□□□ -0.59
RFFL-205ENST00000415395 TIMP2P16035 220 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 ZNF26P17031 533 aaPredicted RBP11.39□□□□□ -0.59
RFFL-205ENST00000415395 ZNF7P17097 686 aaPredicted RBP11.39□□□□□ -0.59
RFFL-205ENST00000415395 TTKP33981 857 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 TNFRSF4P43489 277 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 SPINT3P49223 89 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 CDK9P50750 372 aaKnown RBP11.39□□□□□ -0.59
RFFL-205ENST00000415395 NUP107P57740 925 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 NAA20P61599 178 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 HPCAP84074 193 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 ENPP2Q13822 863 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 KCTD21Q4G0X4 260 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 TECRLQ5HYJ1 363 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 IL23RQ5VWK5 629 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 UGT3A1Q6NUS8 523 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 ERAP2Q6P179 960 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 FAM151BQ6UXP7 276 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 TAS2R42Q7RTR8 314 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 CUZD1Q86UP6 607 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 RBFAQ8N0V3 343 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 METTL25Q8N6Q8 603 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 TXNDC5Q8NBS9 432 aaKnown RBP11.39□□□□□ -0.59
RFFL-205ENST00000415395 HEXDCQ8WVB3 486 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 KCNJ9Q92806 393 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 PPWD1Q96BP3 646 aaKnown RBP11.39□□□□□ -0.59
RFFL-205ENST00000415395 CHFRQ96EP1 664 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 GAS2L1Q99501 681 aaPredicted RBP11.39□□□□□ -0.59
RFFL-205ENST00000415395 TMEM79Q9BSE2 394 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 ANKRD60Q9BZ19 345 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 P2RY12Q9H244 342 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 ASB8Q9H765 288 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 CLK4Q9HAZ1 481 aaKnown RBP11.39□□□□□ -0.59
RFFL-205ENST00000415395 IGSF5Q9NSI5 407 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 ARMC1Q9NVT9 282 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 NDUFAF1Q9Y375 327 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 SNX13Q9Y5W8 968 aa11.39□□□□□ -0.59
RFFL-205ENST00000415395 AQP12BA6NM10 295 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 C16orf96A6NNT2 1141 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 C1QTNF3-AMACRE9PGA6 284 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 VPS4BO75351 444 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 RHOBTB1O94844 696 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 C1SP09871 688 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 PRSS56P0CW18 603 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 ZNF37AP17032 561 aaPredicted RBP11.38□□□□□ -0.59
RFFL-205ENST00000415395 TCN1P20061 433 aaPredicted RBP11.38□□□□□ -0.59
RFFL-205ENST00000415395 IL10P22301 178 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 IGFBP4P22692 258 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 ACRV1P26436 265 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 MMP12P39900 470 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 DPP6P42658 865 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 RANBP1P43487 201 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 CDKL1Q00532 357 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 FOXM1Q08050 763 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 ELP6Q0PNE2 266 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 ZNF460Q14592 562 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 SERPINA9Q86WD7 417 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 CARM1Q86X55 608 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 AQP12AQ8IXF9 295 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 RNF148Q8N7C7 305 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 OR2T34Q8NGX1 318 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 OR2T3Q8NH03 318 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 ATP6V1E2Q96A05 226 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 MARK4Q96L34 752 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 PCDH12Q9NPG4 1184 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 SMOXQ9NWM0 555 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 GID8Q9NWU2 228 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 TMEM181Q9P2C4 612 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 CRLS1Q9UJA2 301 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 OAS3Q9Y6K5 1087 aaKnown RBP11.38□□□□□ -0.59
RFFL-205ENST00000415395 A0A0U1RQS6 177 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 KANSL1LA0AUZ9 987 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 A8MT66 165 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms