RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 TSPAN12O95859 305 aa15.25■□□□□ 0.03
SHMT2-202ENST00000414700 OR56A5P0C7T3 313 aa15.25■□□□□ 0.03
SHMT2-202ENST00000414700 ETV4P43268 484 aa15.25■□□□□ 0.03
SHMT2-202ENST00000414700 GCNT7Q6ZNI0 430 aa15.25■□□□□ 0.03
SHMT2-202ENST00000414700 MAML2Q8IZL2 1156 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-202ENST00000414700 LILRA3Q8N6C8 439 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-202ENST00000414700 TMEM145Q8NBT3 493 aa15.25■□□□□ 0.03
SHMT2-202ENST00000414700 EEF1AKMT1Q8WVE0 214 aa15.25■□□□□ 0.03
SHMT2-202ENST00000414700 SNX19Q92543 992 aa15.25■□□□□ 0.03
SHMT2-202ENST00000414700 ORAI3Q9BRQ5 295 aa15.25■□□□□ 0.03
SHMT2-202ENST00000414700 IER2Q9BTL4 223 aa15.25■□□□□ 0.03
SHMT2-202ENST00000414700 CCDC28BQ9BUN5 200 aa15.25■□□□□ 0.03
SHMT2-202ENST00000414700 APOOQ9BUR5 198 aa15.25■□□□□ 0.03
SHMT2-202ENST00000414700 CAAP1Q9H8G2 361 aa15.25■□□□□ 0.03
SHMT2-202ENST00000414700 SAR1AQ9NR31 198 aa15.25■□□□□ 0.03
SHMT2-202ENST00000414700 DCDC2Q9UHG0 476 aa15.25■□□□□ 0.03
SHMT2-202ENST00000414700 TRMT6Q9UJA5 497 aaKnown RBP15.25■□□□□ 0.03
SHMT2-202ENST00000414700 IKZF3Q9UKT9 509 aa15.25■□□□□ 0.03
SHMT2-202ENST00000414700 RUVBL2Q9Y230 463 aaKnown RBP15.25■□□□□ 0.03
SHMT2-202ENST00000414700 DHRS7Q9Y394 339 aa15.25■□□□□ 0.03
SHMT2-202ENST00000414700 SPAG17Q6Q759 2223 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 TK2O00142 265 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 GLRA3O75311 464 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 CD9P21926 228 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 PRLHRP49683 370 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 CCR5P51681 352 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 GSTA3Q16772 222 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 LVRNQ6Q4G3 990 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 CRTC3Q6UUV7 619 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 OTOAQ7RTW8 1153 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 TRAPPC5Q8IUR0 188 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 IQCGQ9H095 443 aaKnown RBP15.24■□□□□ 0.03
SHMT2-202ENST00000414700 VCX3BQ9H321 246 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 POPDC3Q9HBV1 291 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 VCX3AQ9NNX9 186 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 MRPL40Q9NQ50 206 aaKnown RBP15.24■□□□□ 0.03
SHMT2-202ENST00000414700 TM7SF3Q9NS93 570 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 A0A087X1B8 175 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 TTC36A6NLP5 189 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 FPGTO14772 594 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 ZBTB14O43829 449 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 SBK3P0C264 359 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 MYCLP1P12525 358 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-202ENST00000414700 TDGF1P13385 188 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 MAOBP27338 520 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 TEAD1P28347 426 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 PBLDP30039 288 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-202ENST00000414700 FNTBP49356 437 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 SESN3P58005 492 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 RPL6Q02878 288 aaKnown RBP15.24■□□□□ 0.03
SHMT2-202ENST00000414700 BOP1Q14137 746 aaKnown RBP15.24■□□□□ 0.03
SHMT2-202ENST00000414700 PLA2G4EQ3MJ16 856 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 LRRC74BQ6ZQY2 392 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 TRIM73Q86UV7 250 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 VRK3Q8IV63 474 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 FSTL5Q8N475 847 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-202ENST00000414700 TMEM151AQ8N4L1 468 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 DENND6BQ8NEG7 585 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 C10orf82Q8WW14 230 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 NCSTNQ92542 709 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 GATA6Q92908 595 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 PTERQ96BW5 349 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 PRMT8Q9NR22 394 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-202ENST00000414700 PHPT1Q9NRX4 125 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-202ENST00000414700 ANKRD6Q9Y2G4 727 aa15.24■□□□□ 0.03
SHMT2-202ENST00000414700 NDUFS2O75306 463 aa15.23■□□□□ 0.03
SHMT2-202ENST00000414700 ZWINTO95229 277 aa15.23■□□□□ 0.03
SHMT2-202ENST00000414700 CBX6O95503 412 aa15.23■□□□□ 0.03
SHMT2-202ENST00000414700 LTA4HP09960 611 aaKnown RBP15.23■□□□□ 0.03
SHMT2-202ENST00000414700 CD1DP15813 335 aa15.23■□□□□ 0.03
SHMT2-202ENST00000414700 AOAHP28039 575 aa15.23■□□□□ 0.03
SHMT2-202ENST00000414700 SERPINB4P48594 390 aa15.23■□□□□ 0.03
SHMT2-202ENST00000414700 SLC34A1Q06495 639 aa15.23■□□□□ 0.03
SHMT2-202ENST00000414700 HSPA14Q0VDF9 509 aa15.23■□□□□ 0.03
SHMT2-202ENST00000414700 ILF2Q12905 390 aaKnown RBP15.23■□□□□ 0.03
SHMT2-202ENST00000414700 KPNB1Q14974 876 aaKnown RBP15.23■□□□□ 0.03
SHMT2-202ENST00000414700 RCN1Q15293 331 aa15.23■□□□□ 0.03
SHMT2-202ENST00000414700 ACSBG2Q5FVE4 666 aa15.23■□□□□ 0.03
SHMT2-202ENST00000414700 PIWIL4Q7Z3Z4 852 aaKnown RBP15.23■□□□□ 0.03
SHMT2-202ENST00000414700 C11orf96Q7Z7L8 435 aa15.23■□□□□ 0.03
SHMT2-202ENST00000414700 ZBTB2Q8N680 514 aa15.23■□□□□ 0.03
SHMT2-202ENST00000414700 NRG4Q8WWG1 115 aa15.23■□□□□ 0.03
SHMT2-202ENST00000414700 PANX3Q96QZ0 392 aa15.23■□□□□ 0.03
SHMT2-202ENST00000414700 MECRQ9BV79 373 aa15.23■□□□□ 0.03
SHMT2-202ENST00000414700 PNMA8BQ9ULN7 279 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-202ENST00000414700 TDRD6O60522 2096 aaKnown RBP15.23■□□□□ 0.03
SHMT2-202ENST00000414700 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 A0A1W2PPC4 97 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 SCAMP1O15126 338 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 TM9SF1O15321 606 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 VEGFDO43915 354 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 PLIN3O60664 434 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 EDF1O60869 148 aaKnown RBP15.22■□□□□ 0.03
SHMT2-202ENST00000414700 AP2A2O94973 939 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 PROCP04070 461 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 CEACAM5P06731 702 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 IMPDH2P12268 514 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 GSTT1P30711 240 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 KCNC1P48547 511 aa15.22■□□□□ 0.03
SHMT2-202ENST00000414700 SLC18A1P54219 525 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms