RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 NXPH1P58417 271 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 AP1S1P61966 158 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 RPS21P63220 83 aaKnown RBP4.87□□□□□ -1.63
VPS41-205ENST00000414632 PPIDQ08752 370 aaKnown RBP4.87□□□□□ -1.63
VPS41-205ENST00000414632 NIPAL4Q0D2K0 466 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 CCDC15Q0P6D6 951 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 RALGDSQ12967 914 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 SGCGQ13326 291 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 GALNT3Q14435 633 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 PUM1Q14671 1186 aaKnown RBP eCLIP4.87□□□□□ -1.63
VPS41-205ENST00000414632 RFTN1Q14699 578 aaPredicted RBP4.87□□□□□ -1.63
VPS41-205ENST00000414632 KRT72Q14CN4 511 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 ACOX1Q15067 660 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 IRF4Q15306 451 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 TAZQ16635 292 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 UGP2Q16851 508 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 KCTD19Q17RG1 926 aaPredicted RBP4.87□□□□□ -1.63
VPS41-205ENST00000414632 TFDP3Q5H9I0 405 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 TPRG1LQ5T0D9 272 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 PHF19Q5T6S3 580 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 LRRC38Q5VT99 294 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 KIAA1161Q6NSJ0 714 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 FAM180AQ6UWF9 173 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 PEX26Q7Z412 305 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 RABEPKQ7Z6M1 372 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 TSPAN33Q86UF1 283 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 NT5DC3Q86UY8 548 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 NAXDQ8IW45 347 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 LRRC8AQ8IWT6 810 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 SLC22A18ASQ8N1D0 253 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 BBS5Q8N3I7 341 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 TEX26Q8N6G2 289 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 ANKRD42Q8N9B4 389 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 OR5AN1Q8NGI8 311 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 EXD1Q8NHP7 514 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 UBE2Q2Q8WVN8 375 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 MAML1Q92585 1016 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 HDAC11Q96DB2 347 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 RBM41Q96IZ5 413 aaKnown RBP4.87□□□□□ -1.63
VPS41-205ENST00000414632 FEM1CQ96JP0 617 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 BMFQ96LC9 184 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 OLFM3Q96PB7 478 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 NUDCD1Q96RS6 583 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 RBM15Q96T37 977 aaKnown RBP eCLIP4.87□□□□□ -1.63
VPS41-205ENST00000414632 SYT3Q9BQG1 590 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 MGME1Q9BQP7 344 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 TACO1Q9BSH4 297 aaKnown RBP4.87□□□□□ -1.63
VPS41-205ENST00000414632 RTKNQ9BST9 563 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.87□□□□□ -1.63
VPS41-205ENST00000414632 CPEB1Q9BZB8 566 aaKnown RBP4.87□□□□□ -1.63
VPS41-205ENST00000414632 POLR1EQ9GZS1 481 aaKnown RBP4.87□□□□□ -1.63
VPS41-205ENST00000414632 SUDS3Q9H7L9 328 aaPredicted RBP4.87□□□□□ -1.63
VPS41-205ENST00000414632 MBNL1Q9NR56 388 aaKnown RBP4.87□□□□□ -1.63
VPS41-205ENST00000414632 TM7SF3Q9NS93 570 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 DLL3Q9NYJ7 618 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.87□□□□□ -1.63
VPS41-205ENST00000414632 CD84Q9UIB8 345 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 CHKBQ9Y259 395 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 BTBD3Q9Y2F9 522 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.87□□□□□ -1.63
VPS41-205ENST00000414632 PCDHA3Q9Y5H8 950 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 ZNF106Q9H2Y7 1883 aaKnown RBP4.87□□□□□ -1.63
VPS41-205ENST00000414632 PLXNB3Q9ULL4 1909 aa4.87□□□□□ -1.63
VPS41-205ENST00000414632 TCRBV7S2A1N4TA0A589 114 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 NPIPB15A6NHN6 443 aaPredicted RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 LRRC14BA6NHZ5 514 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 RHPN2P1A8MT19 583 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 KIAA1324LA8MWY0 1029 aaPredicted RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 ZNF487B1APH4 448 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 H7C0C1 242 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 K7ESM1 405 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 TRAFD1O14545 582 aaPredicted RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 FPGTO14772 594 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 VILLO15195 856 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 FFAR2O15552 330 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 PIP5K1CO60331 668 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 PMPCBO75439 489 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 TM7SF2O76062 418 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 PGLSO95336 258 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 TOP3BO95985 862 aaKnown RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 WNT11O96014 354 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 MT-CYBP00156 380 aaPredicted RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 PTMAP06454 111 aaKnown RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 C8BP07358 591 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 MMP2P08253 660 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 CCDC175P0C221 793 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 ELFN1P0C7U0 828 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 PIRTP0C851 137 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 MYF5P13349 255 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 CD59P13987 128 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 ZFXP17010 805 aaPredicted RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 GM2AP17900 193 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 TGM2P21980 687 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 LHCGRP22888 699 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 CTSSP25774 331 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 PTPN3P26045 913 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 CTNNA2P26232 953 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 RBL1P28749 1068 aa4.86□□□□□ -1.63
VPS41-205ENST00000414632 ADSLP30566 484 aaPredicted RBP4.86□□□□□ -1.63
VPS41-205ENST00000414632 HNF1BP35680 557 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms