RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 BANPQ8N9N5 519 aa17.02■□□□□ 0.31
PHRF1-202ENST00000413872 TUBGCP5Q96RT8 1024 aa17.02■□□□□ 0.31
PHRF1-202ENST00000413872 FBXL12Q9NXK8 326 aa17.02■□□□□ 0.31
PHRF1-202ENST00000413872 UGT2B11O75310 529 aa17.02■□□□□ 0.31
PHRF1-202ENST00000413872 WFS1O76024 890 aa17.02■□□□□ 0.31
PHRF1-202ENST00000413872 ADH1BP00325 375 aa17.02■□□□□ 0.31
PHRF1-202ENST00000413872 IQCF3P0C7M6 154 aa17.02■□□□□ 0.31
PHRF1-202ENST00000413872 RPS14P62263 151 aaKnown RBP17.02■□□□□ 0.31
PHRF1-202ENST00000413872 RPP38P78345 283 aaKnown RBP17.02■□□□□ 0.31
PHRF1-202ENST00000413872 SLC25A11Q02978 314 aaKnown RBP17.02■□□□□ 0.31
PHRF1-202ENST00000413872 TAB1Q15750 504 aa17.02■□□□□ 0.31
PHRF1-202ENST00000413872 OR2T34Q8NGX1 318 aa17.02■□□□□ 0.31
PHRF1-202ENST00000413872 OR2T3Q8NH03 318 aa17.02■□□□□ 0.31
PHRF1-202ENST00000413872 ARFGEF2Q9Y6D5 1785 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 TULP2O00295 520 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 EPOP01588 193 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 ZNF730Q6ZMV8 503 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 LYSMD3Q7Z3D4 306 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 FAM98AQ8NCA5 519 aaKnown RBP17.01■□□□□ 0.31
PHRF1-202ENST00000413872 KLK6Q92876 244 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 TRIM43BA6NCK2 446 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 PRAMEF11O60813 436 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 KRT36O76013 467 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 ACP5P13686 325 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 ACVRL1P37023 503 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 NRG1Q02297 640 aaPredicted RBP17.01■□□□□ 0.31
PHRF1-202ENST00000413872 DGCR6Q14129 220 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 LRRC70Q7Z2Q7 622 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 SLC30A8Q8IWU4 369 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 SLC38A4Q969I6 547 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 HMG20AQ9NP66 347 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 DNAAF2Q9NVR5 837 aaKnown RBP17.01■□□□□ 0.31
PHRF1-202ENST00000413872 ZNF282Q9UDV7 671 aaPredicted RBP17.01■□□□□ 0.31
PHRF1-202ENST00000413872 ZNF865P0CJ78 1059 aaPredicted RBP17.01■□□□□ 0.31
PHRF1-202ENST00000413872 TAS2R50P59544 299 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 KCNJ2P63252 427 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 EML3Q32P44 896 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 LIX1Q8N485 282 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 TSPAN14Q8NG11 270 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 ZNF354BQ96LW1 612 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 ADAMTS10Q9H324 1103 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 SFXN1Q9H9B4 322 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 ANKHQ9HCJ1 492 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 ARL8BQ9NVJ2 186 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 THUMPD1Q9NXG2 353 aaKnown RBP17.01■□□□□ 0.31
PHRF1-202ENST00000413872 IFT80Q9P2H3 777 aaPredicted RBP17.01■□□□□ 0.31
PHRF1-202ENST00000413872 ARRB1P49407 418 aaPredicted RBP17.01■□□□□ 0.31
PHRF1-202ENST00000413872 CDK9P50750 372 aaKnown RBP17.01■□□□□ 0.31
PHRF1-202ENST00000413872 TCEAL5Q5H9L2 206 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 TRMT10BQ6PF06 316 aaKnown RBP17.01■□□□□ 0.31
PHRF1-202ENST00000413872 PTCHD4Q6ZW05 846 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 CYP2U1Q7Z449 544 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 OAFQ86UD1 273 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 ADCY4Q8NFM4 1077 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 ZCCHC10Q8TBK6 192 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 TLCD1Q96CP7 247 aa17.01■□□□□ 0.31
PHRF1-202ENST00000413872 PTDSS1P48651 473 aaKnown RBP17■□□□□ 0.31
PHRF1-202ENST00000413872 C17orf99Q6UX52 265 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 CXXC5Q7LFL8 322 aaKnown RBP17■□□□□ 0.31
PHRF1-202ENST00000413872 AMIGO2Q86SJ2 522 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 PQLC1Q8N2U9 271 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 ENKURQ8TC29 256 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 CYB5D2Q8WUJ1 264 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 CEP295NLQ96MC4 621 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 HCN3Q9P1Z3 774 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 PDPK1O15530 556 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 ENTPD5O75356 428 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 SRPRAP08240 638 aaKnown RBP17■□□□□ 0.31
PHRF1-202ENST00000413872 PTPN5P54829 565 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 HERVK_113P63132 956 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 TMEM164Q5U3C3 297 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 PEG10Q86TG7 708 aaKnown RBP17■□□□□ 0.31
PHRF1-202ENST00000413872 RANBP3LQ86VV4 465 aaPredicted RBP17■□□□□ 0.31
PHRF1-202ENST00000413872 NUDT13Q86X67 352 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 OR7A2PQ8NGA2 310 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 ERVK-6Q9BXR3 956 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 BACE2Q9Y5Z0 518 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 MAGEB17A8MXT2 336 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 J3KR12 359 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 PIP5K1BO14986 540 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 TULP3O75386 442 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 GPIP06744 558 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 ATP1B2P14415 290 aaPredicted RBP17■□□□□ 0.31
PHRF1-202ENST00000413872 MYL9P24844 172 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 PTX3P26022 381 aaPredicted RBP17■□□□□ 0.31
PHRF1-202ENST00000413872 DHPSP49366 369 aaPredicted RBP17■□□□□ 0.31
PHRF1-202ENST00000413872 NR1H2P55055 460 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 DLG1Q12959 904 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 SMPDL3AQ92484 453 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 OSER1Q9NX31 292 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 KPNA4O00629 521 aaPredicted RBP17■□□□□ 0.31
PHRF1-202ENST00000413872 XKRYO14609 159 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 CFIP05156 583 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 DLDP09622 509 aaKnown RBP17■□□□□ 0.31
PHRF1-202ENST00000413872 IMPDH1P20839 514 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 CHRNA6Q15825 494 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 AGAP11Q8TF27 550 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 LRIG1Q96JA1 1093 aa17■□□□□ 0.31
PHRF1-202ENST00000413872 PAIP2BQ9ULR5 123 aaKnown RBP17■□□□□ 0.31
PHRF1-202ENST00000413872 ADAMDEC1O15204 470 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms