RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 NRG1Q02297 640 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 SH3D19Q5HYK7 790 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 GJD3Q8N144 294 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 POF1BQ8WVV4 589 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 FUBP3Q96I24 572 aaKnown RBP eCLIP13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 SLC35C2Q9NQQ7 365 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 UCKL1Q9NWZ5 548 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 GTF2IRD1Q9UHL9 959 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 RAB23Q9ULC3 237 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 COL14A1Q05707 1796 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 TNFRSF11BO00300 401 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 TOR1BO14657 336 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 AP2A2O94973 939 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 EOMESO95936 686 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 IFNA7P01567 189 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 RLN1P04808 185 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 PGRP06401 933 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 CREB1P16220 341 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 HSPA7P48741 367 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 FLT3LGP49771 235 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 WDR4P57081 412 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 ANO7Q6IWH7 933 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 MED27Q6P2C8 311 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 LDB1Q86U70 411 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 EIF3KQ9UBQ5 218 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 TLL2Q9Y6L7 1015 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 TBX1O43435 398 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 CHST10O43529 356 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 CPNE3O75131 537 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 FAUP35544 74 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 NOGQ13253 232 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 RALGPS1Q5JS13 557 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 CCSAPQ6IQ19 270 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 TRMT10BQ6PF06 316 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 SERPINA9Q86WD7 417 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 ASB12Q8WXK4 309 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 AP2M1Q96CW1 435 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 ZNF570Q96NI8 536 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 IRAK3Q9Y616 596 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 ZNF541Q9H0D2 1346 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 MYBPHLA2RUH7 354 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 KLF11O14901 512 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 ADAMTS3O15072 1205 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 ADAMDEC1O15204 470 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 MAPK12P53778 367 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 KCNJ11Q14654 390 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 NADK2Q4G0N4 442 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 FUT10Q6P4F1 479 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 PHYKPLQ8IUZ5 450 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 SPAG16Q8N0X2 631 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 C11orf65Q8NCR3 313 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 OXSMQ9NWU1 459 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 SPATA7Q9P0W8 599 aa13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 ZNF214Q9UL59 606 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-202ENST00000413806 FAM159BA6NKW6 160 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 UGT2B4P06133 528 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 SUZ12Q15022 739 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 TCEAL1Q15170 157 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 OCLNQ16625 522 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 IRAK1BP1Q5VVH5 260 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 KIAA1324Q6UXG2 1013 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 ZC3H3Q8IXZ2 948 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 KCTD13Q8WZ19 329 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 ZNF599Q96NL3 588 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 ACSS2Q9NR19 701 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 PHPT1Q9NRX4 125 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 MAP10Q9P2G4 905 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 MRPS33Q9Y291 106 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 AIREO43918 545 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 PRNPP04156 253 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 ANXA4P09525 319 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 TAS2R39P59534 338 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 RPL26P61254 145 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 BTN3A2P78410 334 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 LIX1Q8N485 282 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 SRFBP1Q8NEF9 429 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 C1QTNF1Q9BXJ1 281 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 INTS7Q9NVH2 962 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 PLK2Q9NYY3 685 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 MAT2BQ9NZL9 334 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 ATPIF1Q9UII2 106 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 U3KQV3 271 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 ISPDA4D126 451 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 FADS2P1A8MWK0 482 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 OR4F21O95013 312 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 SMCO1Q147U7 214 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 SOWAHAQ2M3V2 549 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 NCBP2-AS2Q69YL0 99 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 GALNT5Q7Z7M9 940 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 SLC34A3Q8N130 599 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 KCNS3Q9BQ31 491 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 BCL2L14Q9BZR8 327 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 FAM83DQ9H4H8 585 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 TAS2R1Q9NYW7 299 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 SEC14L3Q9UDX4 400 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 TLR6Q9Y2C9 796 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 FAM234BA2RU67 622 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 FAM86C2PA6NEL3 165 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 YJEFN3A6XGL0 299 aa13.54□□□□□ -0.24
SMARCA4-202ENST00000413806 NDUFS2O75306 463 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms