RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	FAM136A	Q96C01	138 aa		12.88	□□□□□ -0.35
SF1-206	ENST00000413725	CXorf40B	Q96DE9	158 aa		12.88	□□□□□ -0.35
SF1-206	ENST00000413725	ELMO2	Q96JJ3	720 aa		12.88	□□□□□ -0.35
SF1-206	ENST00000413725	GPR21	Q99679	349 aa		12.88	□□□□□ -0.35
SF1-206	ENST00000413725	CCDC77	Q9BR77	488 aa		12.88	□□□□□ -0.35
SF1-206	ENST00000413725	LATS2	Q9NRM7	1088 aa		12.88	□□□□□ -0.35
SF1-206	ENST00000413725	KLHL42	Q9P2K6	505 aa		12.88	□□□□□ -0.35
SF1-206	ENST00000413725	TRMT6	Q9UJA5	497 aa	Known RBP	12.88	□□□□□ -0.35
SF1-206	ENST00000413725	PADI4	Q9UM07	663 aa		12.88	□□□□□ -0.35
SF1-206	ENST00000413725	PSMD13	Q9UNM6	376 aa		12.88	□□□□□ -0.35
SF1-206	ENST00000413725	VWA7	Q9Y334	891 aa		12.88	□□□□□ -0.35
SF1-206	ENST00000413725	HEBP2	Q9Y5Z4	205 aa		12.88	□□□□□ -0.35
SF1-206	ENST00000413725	TRBV23OR9-2	A0A075B6M9	112 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	TNFSF14	O43557	240 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	ERLIN1	O75477	346 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	GPC4	O75487	556 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	SLCO2B1	O94956	709 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	VIP	P01282	170 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	MTHFD1	P11586	935 aa	Known RBP	12.87	□□□□□ -0.35
SF1-206	ENST00000413725	BRAF	P15056	766 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	GLB1	P16278	677 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	CD9	P21926	228 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	ATP5D	P30049	168 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	CLCN7	P51798	805 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	LIMK2	P53671	638 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	MAZ	P56270	477 aa	Known RBP	12.87	□□□□□ -0.35
SF1-206	ENST00000413725	HHEX	Q03014	270 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	PDAP1	Q13442	181 aa	Known RBP	12.87	□□□□□ -0.35
SF1-206	ENST00000413725	SLC29A2	Q14542	456 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	CLCA4	Q14CN2	919 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	XKR5	Q6UX68	686 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	NAPRT	Q6XQN6	538 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	PDZD3	Q86UT5	571 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	C17orf82	Q86X59	251 aa	Predicted RBP	12.87	□□□□□ -0.35
SF1-206	ENST00000413725	SLC22A15	Q8IZD6	547 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	ARL14	Q8N4G2	192 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	PATE1	Q8WXA2	126 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	INPP5D	Q92835	1189 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	MRRF	Q96E11	262 aa	Known RBP	12.87	□□□□□ -0.35
SF1-206	ENST00000413725	TSPAN17	Q96FV3	270 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	RMDN2	Q96LZ7	410 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	C12orf66	Q96MD2	445 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	MCMBP	Q9BTE3	642 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	OR52A5	Q9H2C5	316 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	POT1	Q9NUX5	634 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	IMP3	Q9NV31	184 aa	Known RBP	12.87	□□□□□ -0.35
SF1-206	ENST00000413725	CPNE7	Q9UBL6	633 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	WDR37	Q9Y2I8	494 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	DHRS7	Q9Y394	339 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	PTPRB	P23467	1997 aa		12.87	□□□□□ -0.35
SF1-206	ENST00000413725	CPED1	A4D0V7	1026 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	EME2	A4GXA9	379 aa	Predicted RBP	12.86	□□□□□ -0.35
SF1-206	ENST00000413725	OR52A4P	A6NMU1	304 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	RHPN2P1	A8MT19	583 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	POC1B-GALNT4	F8VUJ3	575 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	EIF3F	O00303	357 aa	Predicted RBP	12.86	□□□□□ -0.35
SF1-206	ENST00000413725	TM4SF5	O14894	197 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	ZW10	O43264	779 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	NUDT21	O43809	227 aa	Known RBP	12.86	□□□□□ -0.35
SF1-206	ENST00000413725	CBSL	P0DN79	551 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	CEACAM1	P13688	526 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	ENO3	P13929	434 aa	Predicted RBP	12.86	□□□□□ -0.35
SF1-206	ENST00000413725	XRCC1	P18887	633 aa	Predicted RBP	12.86	□□□□□ -0.35
SF1-206	ENST00000413725	SAT1	P21673	171 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	FDXR	P22570	491 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	PDHA2	P29803	388 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	CBS	P35520	551 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	MSH2	P43246	934 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	FASLG	P48023	281 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	RGS4	P49798	205 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	SERPINB9	P50453	376 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	CDKN2D	P55273	166 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	POU4F1	Q01851	419 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	KRT33B	Q14525	404 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	TRIP6	Q15654	476 aa	Known RBP	12.86	□□□□□ -0.35
SF1-206	ENST00000413725	RPE65	Q16518	533 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	CAPRIN2	Q6IMN6	1127 aa	Known RBP	12.86	□□□□□ -0.35
SF1-206	ENST00000413725	LRRC8E	Q6NSJ5	796 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	GLRX5	Q86SX6	157 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	SFTPA2	Q8IWL1	248 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	RBM12B	Q8IXT5	1001 aa	Known RBP	12.86	□□□□□ -0.35
SF1-206	ENST00000413725	SIDT2	Q8NBJ9	832 aa	Known RBP	12.86	□□□□□ -0.35
SF1-206	ENST00000413725	CD200R1	Q8TD46	325 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	SKA2	Q8WVK7	121 aa	Predicted RBP	12.86	□□□□□ -0.35
SF1-206	ENST00000413725	SLC44A1	Q8WWI5	657 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	SH3KBP1	Q96B97	665 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	FOPNL	Q96NB1	174 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	PAFAH2	Q99487	392 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	GPR22	Q99680	433 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	EPB41L4B	Q9H329	900 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	SCHIP1	Q9P0W5	487 aa	Predicted RBP	12.86	□□□□□ -0.35
SF1-206	ENST00000413725	ZNF624	Q9P2J8	865 aa	Predicted RBP	12.86	□□□□□ -0.35
SF1-206	ENST00000413725	SLC39A10	Q9ULF5	831 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	CDYL	Q9Y232	598 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	MED16	Q9Y2X0	877 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	COLEC10	Q9Y6Z7	277 aa		12.86	□□□□□ -0.35
SF1-206	ENST00000413725	LY6G6E	A0A0G2JKS1	128 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	FAM155B	O75949	473 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	RPN2	P04844	631 aa		12.85	□□□□□ -0.35
SF1-206	ENST00000413725	ITGA2B	P08514	1039 aa		12.85	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms