RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 NEK10Q6ZWH5 1172 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 MAATS1Q7Z4T9 603 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 B3GNT8Q7Z7M8 397 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 SPACA3Q8IXA5 215 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 CNPY4Q8N129 248 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 SLC35F6Q8N357 371 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 ESX1Q8N693 406 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 BMPERQ8N8U9 685 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 PATE1Q8WXA2 126 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 TFGQ92734 400 aaPredicted RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 USP7Q93009 1102 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 KIAA1143Q96AT1 154 aaPredicted RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 SLC41A2Q96JW4 573 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 CCDC74BQ96LY2 380 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 C12orf66Q96MD2 445 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 FOPNLQ96NB1 174 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 LRFN5Q96NI6 719 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 FERD3LQ96RJ6 166 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 INSM2Q96T92 566 aaPredicted RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 NAPGQ99747 312 aaPredicted RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 DPH2Q9BQC3 489 aaPredicted RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 NUDT22Q9BRQ3 303 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 RAB11FIP5Q9BXF6 653 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 SPRY4Q9C004 299 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 OR52A5Q9H2C5 316 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 COG4Q9H9E3 785 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 CHRAC1Q9NRG0 131 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 TREX1Q9NSU2 369 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 HRASLS2Q9NWW9 162 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 SMARCAL1Q9NZC9 954 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 GNPTGQ9UJJ9 305 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 SERTAD3Q9UJW9 196 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 KCND3Q9UK17 655 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 LHX6Q9UPM6 363 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 DNAJC16Q9Y2G8 782 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 NEU2Q9Y3R4 380 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 KCTD3Q9Y597 815 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 FAM169AQ9Y6X4 670 aa6.24□□□□□ -1.41
USP54-202ENST00000413442 TPRP12270 2363 aaKnown RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 KMT2BQ9UMN6 2715 aaPredicted RBP6.24□□□□□ -1.41
USP54-202ENST00000413442 PCM1Q15154 2024 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 OR5K3A6NET4 321 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 ZNF839A8K0R7 811 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 TARM1B6A8C7 271 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 GOT2P00505 430 aaKnown RBP6.23□□□□□ -1.41
USP54-202ENST00000413442 CBSLP0DN79 551 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 AOAHP28039 575 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 ACADLP28330 430 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 CBSP35520 551 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 ARL4DP49703 201 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 GNG11P61952 73 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 TMPRSS15P98073 1019 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 PTK6Q13882 451 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 FRG1Q14331 258 aaKnown RBP6.23□□□□□ -1.41
USP54-202ENST00000413442 KIR2DS3Q14952 304 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 MORF4L2Q15014 288 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 PLCL1Q15111 1095 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 PPP1R7Q15435 360 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 DBN1Q16643 649 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 TYSND1Q2T9J0 566 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 TTLL9Q3SXZ7 439 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 MANEAQ5SRI9 462 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 ZNF648Q5T619 568 aaPredicted RBP6.23□□□□□ -1.41
USP54-202ENST00000413442 CACHD1Q5VU97 1274 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 PTRHD1Q6GMV3 140 aaKnown RBP6.23□□□□□ -1.41
USP54-202ENST00000413442 NEPROQ6NW34 567 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 KIAA0408Q6ZU52 694 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 NYAP1Q6ZVC0 841 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 CYS1Q717R9 158 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 GALNT7Q86SF2 657 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 PDZD3Q86UT5 571 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 AMIGO1Q86WK6 493 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 PPP1R3BQ86XI6 285 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 JAMLQ86YT9 394 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 PIANPQ8IYJ0 282 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 SLC22A15Q8IZD6 547 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 NLGN4XQ8N0W4 816 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 PDIK1LQ8N165 341 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 D2HGDHQ8N465 521 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 CLDN19Q8N6F1 224 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 NAT8LQ8N9F0 302 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 SIDT2Q8NBJ9 832 aaKnown RBP6.23□□□□□ -1.41
USP54-202ENST00000413442 NLGN4YQ8NFZ3 816 aaPredicted RBP6.23□□□□□ -1.41
USP54-202ENST00000413442 OR5K2Q8NHB8 316 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 HNRNPLLQ8WVV9 542 aaKnown RBP6.23□□□□□ -1.41
USP54-202ENST00000413442 LCN9Q8WX39 176 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 ELMO1Q92556 727 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 ZUFSPQ96AP4 578 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 RAD51AP1Q96B01 352 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 NACC2Q96BF6 587 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 DCBLD2Q96PD2 775 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 C17orf62Q9BQA9 187 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 TBC1D10AQ9BXI6 508 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 AP1M1Q9BXS5 423 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 GPR87Q9BY21 358 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 FOXP3Q9BZS1 431 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 TWSG1Q9GZX9 223 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 ZMYND15Q9H091 742 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 WWP1Q9H0M0 922 aa6.23□□□□□ -1.41
USP54-202ENST00000413442 P2RY12Q9H244 342 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms