RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 PRKG2Q13237 762 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 C9orf152Q5JTZ5 239 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 OR5M10Q6IEU7 315 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 IGF2-ASQ6U949 168 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 DLEU7Q6UYE1 221 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 C16orf59Q7L2K0 433 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 TFAP2DQ7Z6R9 452 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 ZSWIM2Q8NEG5 633 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 CHST13Q8NET6 341 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 SNX33Q8WV41 574 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 FKBP10Q96AY3 582 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 TMCO6Q96DC7 493 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 CYP3A43Q9HB55 503 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 BIN3Q9NQY0 253 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 HMX2A2RU54 273 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 RGSL1A5PLK6 1076 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 HRO43593 1189 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 CST8O60676 142 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 TOP3BO95985 862 aaKnown RBP5.16□□□□□ -1.58
HERC4-205ENST00000412272 ADORA3P0DMS8 318 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 XRCC5P13010 732 aaKnown RBP5.16□□□□□ -1.58
HERC4-205ENST00000412272 ELNP15502 786 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 CA4P22748 312 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 EPHA5P54756 1037 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 ERVK-25P63136 954 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 DEFA6Q01524 100 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 ART3Q13508 389 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 DGKZQ13574 1117 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 GPR50Q13585 617 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 GRK1Q15835 563 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 HIST2H2ACQ16777 129 aaPredicted RBP5.16□□□□□ -1.58
HERC4-205ENST00000412272 RPS26P11Q5JNZ5 115 aaPredicted RBP5.16□□□□□ -1.58
HERC4-205ENST00000412272 NOMO2Q5JPE7 1267 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 GPR158Q5T848 1215 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 KRT39Q6A163 491 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 NOTUMQ6P988 496 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 LMBR1LQ6UX01 489 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 NLGN4XQ8N0W4 816 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 FAM71DQ8N9W8 422 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 RHOXF1Q8NHV9 184 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 CREB3L4Q8TEY5 395 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 RBPMSQ93062 196 aaKnown RBP5.16□□□□□ -1.58
HERC4-205ENST00000412272 KIAA1191Q96A73 305 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 NXPE2Q96DL1 559 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 CMTM5Q96DZ9 223 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 GLT1D1Q96MS3 346 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 LENG8Q96PV6 779 aaPredicted RBP5.16□□□□□ -1.58
HERC4-205ENST00000412272 STRBPQ96SI9 672 aaKnown RBP5.16□□□□□ -1.58
HERC4-205ENST00000412272 CDC6Q99741 560 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 FAM213AQ9BRX8 229 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 ERVK-6Q9BXR3 956 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 GPR88Q9GZN0 384 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 METTL9Q9H1A3 318 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 ASCL3Q9NQ33 180 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 IMPAD1Q9NX62 359 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 ZNF219Q9P2Y4 722 aaPredicted RBP5.16□□□□□ -1.58
HERC4-205ENST00000412272 ERVK-18Q9QC07 812 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 ZNF639Q9UID6 485 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 USP22Q9UPT9 525 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 DGKBQ9Y6T7 804 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 CDK5RAP2Q96SN8 1893 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 SLC22A23A1A5C7 686 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 MEIOCA2RUB1 952 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 VSTM5A8MXK1 200 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 H0YIN7 160 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 H0YIV9 168 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 SSX4O60224 188 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 PGLSO95336 258 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 FGF4P08620 206 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 ERVK-10P10266 1014 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 PRPS2P11908 318 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 DPP6P42658 865 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 DHPSP49366 369 aaPredicted RBP5.16□□□□□ -1.58
HERC4-205ENST00000412272 GZMKP49863 264 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 OVGP1Q12889 678 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 XKR4Q5GH76 650 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 ARMCX4Q5H9R4 360 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 FAM47AQ5JRC9 791 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 VASNQ6EMK4 673 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 KRT80Q6KB66 452 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 RSBN1LQ6PCB5 846 aaPredicted RBP5.16□□□□□ -1.58
HERC4-205ENST00000412272 MON1AQ86VX9 555 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 SLC24A4Q8NFF2 622 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 WFIKKN2Q8TEU8 576 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 NSMAFQ92636 917 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 PROX1Q92786 737 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 FUBP3Q96I24 572 aaKnown RBP eCLIP5.16□□□□□ -1.58
HERC4-205ENST00000412272 SEBOXQ9HB31 216 aaPredicted RBP5.16□□□□□ -1.58
HERC4-205ENST00000412272 PCDH9Q9HC56 1237 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 SARS2Q9NP81 518 aaKnown RBP5.16□□□□□ -1.58
HERC4-205ENST00000412272 PAK6Q9NQU5 681 aaPredicted RBP5.16□□□□□ -1.58
HERC4-205ENST00000412272 C19orf12Q9NSK7 152 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 ALG6Q9Y672 507 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 IGSF9BQ9UPX0 1349 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 NRAPQ86VF7 1730 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 RIC1Q4ADV7 1423 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 A0A0U1RQS6 177 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 EXOC1LA0A1B0GW35 172 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 TGM5O43548 720 aa5.15□□□□□ -1.58
HERC4-205ENST00000412272 NSA2O95478 260 aaKnown RBP5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms