RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 TIAL1Q01085 375 aaKnown RBP eCLIP20.18■□□□□ 0.82
C4orf48-202ENST00000409860 GBX1Q14549 363 aa20.18■□□□□ 0.82
C4orf48-202ENST00000409860 KIR2DS5Q14953 304 aa20.18■□□□□ 0.82
C4orf48-202ENST00000409860 IYDQ6PHW0 289 aa20.18■□□□□ 0.82
C4orf48-202ENST00000409860 OGFOD3Q6PK18 319 aa20.18■□□□□ 0.82
C4orf48-202ENST00000409860 PDZD3Q86UT5 571 aa20.18■□□□□ 0.82
C4orf48-202ENST00000409860 AVL9Q8NBF6 648 aa20.18■□□□□ 0.82
C4orf48-202ENST00000409860 OR2W6PQ8NHA6 318 aa20.18■□□□□ 0.82
C4orf48-202ENST00000409860 NETO1Q8TDF5 533 aa20.18■□□□□ 0.82
C4orf48-202ENST00000409860 SKA2Q8WVK7 121 aaPredicted RBP20.18■□□□□ 0.82
C4orf48-202ENST00000409860 RMDN2Q96LZ7 410 aa20.18■□□□□ 0.82
C4orf48-202ENST00000409860 CAB39LQ9H9S4 337 aa20.18■□□□□ 0.82
C4orf48-202ENST00000409860 EVA1BQ9NVM1 165 aa20.18■□□□□ 0.82
C4orf48-202ENST00000409860 NCKIPSDQ9NZQ3 722 aa20.18■□□□□ 0.82
C4orf48-202ENST00000409860 CDYLQ9Y232 598 aa20.18■□□□□ 0.82
C4orf48-202ENST00000409860 WDR37Q9Y2I8 494 aa20.18■□□□□ 0.82
C4orf48-202ENST00000409860 SMIM23A6NLE4 172 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 EIF3FO00303 357 aaPredicted RBP20.17■□□□□ 0.82
C4orf48-202ENST00000409860 SIGLEC6O43699 453 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 SNRPAP09012 282 aaKnown RBP20.17■□□□□ 0.82
C4orf48-202ENST00000409860 BRAFP15056 766 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 H2AFXP16104 143 aaPredicted RBP20.17■□□□□ 0.82
C4orf48-202ENST00000409860 SLCO1A2P46721 670 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 RPIAP49247 311 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 SERPINB8P50452 374 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 RAB10P61026 200 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 BIRC2Q13490 618 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 ACSBG2Q5FVE4 666 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 LRRC8EQ6NSJ5 796 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 PAQR3Q6TCH7 311 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 TDRPQ86YL5 185 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 VRK3Q8IV63 474 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 NAXDQ8IW45 347 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 TRIM48Q8IWZ4 208 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 CPNE9Q8IYJ1 553 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 NAGSQ8N159 534 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 FAM181AQ8N9Y4 354 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 KYQ8NBH2 561 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 MAPK15Q8TD08 544 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 EPS8L3Q8TE67 593 aaKnown RBP20.17■□□□□ 0.82
C4orf48-202ENST00000409860 RHBDD1Q8TEB9 315 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 CXorf40BQ96DE9 158 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 MTBPQ96DY7 904 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 C12orf66Q96MD2 445 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 ROPN1BQ9BZX4 212 aaPredicted RBP20.17■□□□□ 0.82
C4orf48-202ENST00000409860 STN1Q9H668 368 aaKnown RBP20.17■□□□□ 0.82
C4orf48-202ENST00000409860 ROPN1Q9HAT0 212 aaPredicted RBP20.17■□□□□ 0.82
C4orf48-202ENST00000409860 SYTL2Q9HCH5 934 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 GPAMQ9HCL2 828 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 SCHIP1Q9P0W5 487 aaPredicted RBP20.17■□□□□ 0.82
C4orf48-202ENST00000409860 BTBD3Q9Y2F9 522 aa20.17■□□□□ 0.82
C4orf48-202ENST00000409860 TDRD6O60522 2096 aaKnown RBP20.17■□□□□ 0.82
C4orf48-202ENST00000409860 FAM186AA6NE01 2351 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 TRIM49D1C9J1S8 452 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 RASGRF2O14827 1237 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 NOBOXO60393 691 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 CDH16O75309 829 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 CRABP2P29373 138 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 ZNF460Q14592 562 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 CLCA4Q14CN2 919 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 RASA2Q15283 850 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 NR0B2Q15466 257 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 ZKSCAN8Q15776 578 aaPredicted RBP20.16■□□□□ 0.82
C4orf48-202ENST00000409860 RPE65Q16518 533 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 C14orf28Q4W4Y0 310 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 CAPRIN2Q6IMN6 1127 aaKnown RBP20.16■□□□□ 0.82
C4orf48-202ENST00000409860 NEK10Q6ZWH5 1172 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 RAPH1Q70E73 1250 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 SLC9B2Q86UD5 537 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 CEP97Q8IW35 865 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 SFRP1Q8N474 314 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 GPR156Q8NFN8 814 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 SPDYE1Q8NFV5 336 aaPredicted RBP20.16■□□□□ 0.82
C4orf48-202ENST00000409860 SLC37A2Q8TED4 501 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 FAM122AQ96E09 287 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 APOLD1Q96LR9 279 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 FOPNLQ96NB1 174 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 IMP3Q9NV31 184 aaKnown RBP20.16■□□□□ 0.82
C4orf48-202ENST00000409860 TSR3Q9UJK0 312 aaKnown RBP20.16■□□□□ 0.82
C4orf48-202ENST00000409860 HEBP2Q9Y5Z4 205 aa20.16■□□□□ 0.82
C4orf48-202ENST00000409860 PIKFYVEQ9Y2I7 2098 aa20.15■□□□□ 0.82
C4orf48-202ENST00000409860 TRBV23OR9-2A0A075B6M9 112 aa20.15■□□□□ 0.82
C4orf48-202ENST00000409860 HMX2A2RU54 273 aa20.15■□□□□ 0.82
C4orf48-202ENST00000409860 OR52A4PA6NMU1 304 aa20.15■□□□□ 0.82
C4orf48-202ENST00000409860 PHGDHO43175 533 aaKnown RBP20.15■□□□□ 0.82
C4orf48-202ENST00000409860 SH3BP5O60239 455 aa20.15■□□□□ 0.82
C4orf48-202ENST00000409860 MPC1LP0DKB6 136 aa20.15■□□□□ 0.82
C4orf48-202ENST00000409860 MTHFD1P11586 935 aaKnown RBP20.15■□□□□ 0.82
C4orf48-202ENST00000409860 ZNF37AP17032 561 aaPredicted RBP20.15■□□□□ 0.82
C4orf48-202ENST00000409860 MAZP56270 477 aaKnown RBP20.15■□□□□ 0.82
C4orf48-202ENST00000409860 IL2P60568 153 aa20.15■□□□□ 0.82
C4orf48-202ENST00000409860 DNAJC3Q13217 504 aa20.15■□□□□ 0.82
C4orf48-202ENST00000409860 TAF1BQ53T94 588 aaPredicted RBP20.15■□□□□ 0.82
C4orf48-202ENST00000409860 FBXO38Q6PIJ6 1188 aa20.15■□□□□ 0.82
C4orf48-202ENST00000409860 CCDC91Q7Z6B0 441 aa20.15■□□□□ 0.82
C4orf48-202ENST00000409860 CMC1Q7Z7K0 106 aa20.15■□□□□ 0.82
C4orf48-202ENST00000409860 SLC35F3Q8IY50 421 aa20.15■□□□□ 0.82
C4orf48-202ENST00000409860 MYO1HQ8N1T3 1032 aa20.15■□□□□ 0.82
C4orf48-202ENST00000409860 RIBC1Q8N443 379 aaPredicted RBP20.15■□□□□ 0.82
C4orf48-202ENST00000409860 NKAPQ8N5F7 415 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms