RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 SLCO2B1O94956 709 aa12.2□□□□□ -0.46
CHMP3-204ENST00000409727 FSBPO95073 299 aa12.2□□□□□ -0.46
CHMP3-204ENST00000409727 TRIM23P36406 574 aa12.2□□□□□ -0.46
CHMP3-204ENST00000409727 RPIAP49247 311 aa12.2□□□□□ -0.46
CHMP3-204ENST00000409727 RPL14P50914 215 aaKnown RBP12.2□□□□□ -0.46
CHMP3-204ENST00000409727 PRKAA1Q13131 559 aa12.2□□□□□ -0.46
CHMP3-204ENST00000409727 NFE2L1Q14494 772 aa12.2□□□□□ -0.46
CHMP3-204ENST00000409727 SETDB1Q15047 1291 aa12.2□□□□□ -0.46
CHMP3-204ENST00000409727 MAVSQ7Z434 540 aa12.2□□□□□ -0.46
CHMP3-204ENST00000409727 CUZD1Q86UP6 607 aa12.2□□□□□ -0.46
CHMP3-204ENST00000409727 FAM160A2Q8N612 972 aaPredicted RBP12.2□□□□□ -0.46
CHMP3-204ENST00000409727 TOE1Q96GM8 510 aaKnown RBP12.2□□□□□ -0.46
CHMP3-204ENST00000409727 ZNF514Q96K75 400 aaPredicted RBP12.2□□□□□ -0.46
CHMP3-204ENST00000409727 C6orf106Q9H6K1 298 aaPredicted RBP12.2□□□□□ -0.46
CHMP3-204ENST00000409727 EML4Q9HC35 981 aaKnown RBP12.2□□□□□ -0.46
CHMP3-204ENST00000409727 TNFRSF12AQ9NP84 129 aa12.2□□□□□ -0.46
CHMP3-204ENST00000409727 MRPL40Q9NQ50 206 aaKnown RBP12.2□□□□□ -0.46
CHMP3-204ENST00000409727 ARL15Q9NXU5 204 aa12.2□□□□□ -0.46
CHMP3-204ENST00000409727 PDE10AQ9Y233 779 aa12.2□□□□□ -0.46
CHMP3-204ENST00000409727 SLC5A10A0PJK1 596 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 PABPN1LA6NDY0 278 aaKnown RBP12.19□□□□□ -0.46
CHMP3-204ENST00000409727 H3BM21 787 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 EIF3FO00303 357 aaPredicted RBP12.19□□□□□ -0.46
CHMP3-204ENST00000409727 KLK8O60259 260 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 DIAPH2O60879 1101 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 MPC1LP0DKB6 136 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 MYCLP1P12525 358 aaPredicted RBP12.19□□□□□ -0.46
CHMP3-204ENST00000409727 ARL1P40616 181 aaPredicted RBP12.19□□□□□ -0.46
CHMP3-204ENST00000409727 GDF5P43026 501 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 HSPA7P48741 367 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 PDCD2Q16342 344 aaPredicted RBP12.19□□□□□ -0.46
CHMP3-204ENST00000409727 RBBP7Q16576 425 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 ANKS6Q68DC2 871 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 ALYREFQ86V81 257 aaKnown RBP12.19□□□□□ -0.46
CHMP3-204ENST00000409727 LRRTM4Q86VH4 590 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 ASB11Q8WXH4 323 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 RILPQ96NA2 401 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 APOOQ9BUR5 198 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 KDM4CQ9H3R0 1056 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 COG4Q9H9E3 785 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 SGK2Q9HBY8 427 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 KCNK4Q9NYG8 393 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 WWOXQ9NZC7 414 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 HEY2Q9UBP5 337 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 SLC23A2Q9UGH3 650 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 GPR34Q9UPC5 381 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 INVSQ9Y283 1065 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 CCDC189A1A4V9 331 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 STX16-NPEPL1H3BU86 382 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 STX16O14662 325 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 CHUKO15111 745 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 GRID2O43424 1007 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 LATO43561 262 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 CCNT2O60583 730 aaKnown RBP12.19□□□□□ -0.46
CHMP3-204ENST00000409727 SKAP2O75563 359 aaPredicted RBP12.19□□□□□ -0.46
CHMP3-204ENST00000409727 FUCA1P04066 466 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 C8GP07360 202 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 DCNP07585 359 aaKnown RBP12.19□□□□□ -0.46
CHMP3-204ENST00000409727 HIST1H2AGP0C0S8 130 aaPredicted RBP12.19□□□□□ -0.46
CHMP3-204ENST00000409727 HIST1H2ADP20671 130 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 SERPINB5P36952 375 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 BDKRB1P46663 353 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 ARHGAP8P85298 464 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 CLCQ05315 142 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 TCEA2Q15560 299 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 CLEC6AQ6EIG7 209 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 C6orf89Q6UWU4 347 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 FAM83HQ6ZRV2 1179 aaPredicted RBP12.19□□□□□ -0.46
CHMP3-204ENST00000409727 CHST15Q7LFX5 561 aaPredicted RBP12.19□□□□□ -0.46
CHMP3-204ENST00000409727 TRPM8Q7Z2W7 1104 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 C11orf96Q7Z7L8 435 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 AMZ2Q86W34 360 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 TRIM69Q86WT6 500 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 DCBLD1Q8N8Z6 715 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 PDPRQ8NCN5 879 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 GLMNQ92990 594 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 HIST1H2AHQ96KK5 128 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 NELL2Q99435 816 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 HIST1H2AJQ99878 128 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 H2AFJQ9BTM1 129 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 HGH1Q9BTY7 390 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 GPR174Q9BXC1 333 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 TRIM54Q9BYV2 358 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 NUF2Q9BZD4 464 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 PARVBQ9HBI1 364 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 MID1IP1Q9NPA3 183 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 PCTPQ9UKL6 214 aa12.19□□□□□ -0.46
CHMP3-204ENST00000409727 GOLGA8QA0A0J9YX86 632 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 A0A1B0GTL3 188 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 GOLGA8OA6NCC3 632 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 CCT8L1PA6NM43 557 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 GOLGA8NF8WBI6 632 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 CACNB4O00305 520 aaPredicted RBP12.18□□□□□ -0.46
CHMP3-204ENST00000409727 E2F3O00716 465 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 FPGTO14772 594 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 TAPBPO15533 448 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 JUNP05412 331 aaKnown RBP12.18□□□□□ -0.46
CHMP3-204ENST00000409727 RPS17P08708 135 aaKnown RBP12.18□□□□□ -0.46
CHMP3-204ENST00000409727 C7P10643 843 aa12.18□□□□□ -0.46
CHMP3-204ENST00000409727 ACP5P13686 325 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms