RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 HLA-DPA1P20036 260 aa16.41■□□□□ 0.22
SCRN1-203ENST00000409570 ELAVL4P26378 380 aaKnown RBP16.41■□□□□ 0.22
SCRN1-203ENST00000409570 PREPP48147 710 aa16.41■□□□□ 0.22
SCRN1-203ENST00000409570 ADCY2Q08462 1091 aa16.41■□□□□ 0.22
SCRN1-203ENST00000409570 MYBPC3Q14896 1274 aa16.41■□□□□ 0.22
SCRN1-203ENST00000409570 PDK1Q15118 436 aa16.41■□□□□ 0.22
SCRN1-203ENST00000409570 PPP2R5EQ16537 467 aa16.41■□□□□ 0.22
SCRN1-203ENST00000409570 TEX44Q53QW1 395 aa16.41■□□□□ 0.22
SCRN1-203ENST00000409570 ZFYVE27Q5T4F4 411 aa16.41■□□□□ 0.22
SCRN1-203ENST00000409570 ALKBH5Q6P6C2 394 aaKnown RBP16.41■□□□□ 0.22
SCRN1-203ENST00000409570 SPOCD1Q6ZMY3 1216 aa16.41■□□□□ 0.22
SCRN1-203ENST00000409570 OR4E2Q8NGC2 313 aa16.41■□□□□ 0.22
SCRN1-203ENST00000409570 RMDN2Q96LZ7 410 aa16.41■□□□□ 0.22
SCRN1-203ENST00000409570 ZNF552Q9H707 407 aaPredicted RBP16.41■□□□□ 0.22
SCRN1-203ENST00000409570 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.41■□□□□ 0.22
SCRN1-203ENST00000409570 ACSL5Q9ULC5 683 aa16.41■□□□□ 0.22
SCRN1-203ENST00000409570 A0A0A6YYK5 440 aaPredicted RBP16.4■□□□□ 0.22
SCRN1-203ENST00000409570 GLYATL1P3A0A0U1RQE8 302 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 LRRD1A4D1F6 860 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 C3orf70A6NLC5 250 aaPredicted RBP16.4■□□□□ 0.22
SCRN1-203ENST00000409570 ZNF487B1APH4 448 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 C9J4A7 227 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 SERPING1P05155 500 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 ST6GAL1P15907 406 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 CD68P34810 354 aaPredicted RBP16.4■□□□□ 0.22
SCRN1-203ENST00000409570 HADHAP40939 763 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 CHRNA4P43681 627 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 LMAN1P49257 510 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 PRKAA1Q13131 559 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 ITGA9Q13797 1035 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 LONRF2Q1L5Z9 754 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 SIRPB2Q5JXA9 342 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 DCAF10Q5QP82 559 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 LYPLAL1Q5VWZ2 237 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 KDELC1Q6UW63 502 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 DET1Q7L5Y6 550 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 CUZD1Q86UP6 607 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 GALNT16Q8N428 558 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 OR2L2Q8NH16 312 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 NAT14Q8WUY8 206 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 SYN2Q92777 582 aaPredicted RBP16.4■□□□□ 0.22
SCRN1-203ENST00000409570 IP6K3Q96PC2 410 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 DPH2Q9BQC3 489 aaPredicted RBP16.4■□□□□ 0.22
SCRN1-203ENST00000409570 DHRS4Q9BTZ2 278 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 ILKAPQ9H0C8 392 aaPredicted RBP16.4■□□□□ 0.22
SCRN1-203ENST00000409570 SMOXQ9NWM0 555 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 CTTNBP2NLQ9P2B4 639 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 FAM8A1Q9UBU6 413 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 NENFQ9UMX5 172 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 SRPK3Q9UPE1 567 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 PADI2Q9Y2J8 665 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 PCDHGA10Q9Y5H3 936 aa16.4■□□□□ 0.22
SCRN1-203ENST00000409570 PDZD2O15018 2839 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 APOL1O14791 398 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 PPP1R12AO14974 1030 aaPredicted RBP16.39■□□□□ 0.21
SCRN1-203ENST00000409570 ZNF749O43361 778 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 BUD23O43709 281 aaKnown RBP16.39■□□□□ 0.21
SCRN1-203ENST00000409570 SERPINC1P01008 464 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 ALPPP05187 535 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 SLC35G4P0C7Q5 338 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 PRF1P14222 555 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 MSH3P20585 1137 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 PTPN3P26045 913 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 NDUFS1P28331 727 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 PRDX3P30048 256 aaKnown RBP16.39■□□□□ 0.21
SCRN1-203ENST00000409570 GLRBP48167 497 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 WNT3AP56704 352 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 SSPNQ14714 243 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 NR1I3Q14994 352 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 Q6ZS92 163 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 SLC25A41Q8N5S1 370 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 LILRA3Q8N6C8 439 aaPredicted RBP16.39■□□□□ 0.21
SCRN1-203ENST00000409570 ST6GALNAC3Q8NDV1 305 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.39■□□□□ 0.21
SCRN1-203ENST00000409570 UBE2Q2Q8WVN8 375 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 TEKT5Q96M29 485 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 FER1L6-AS2Q96M78 137 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 PHF12Q96QT6 1004 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 NRTNQ99748 197 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 PITPNM3Q9BZ71 974 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 SLC7A5P2Q9GIP4 190 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 ZBTB20Q9HC78 741 aaPredicted RBP16.39■□□□□ 0.21
SCRN1-203ENST00000409570 UVRAGQ9P2Y5 699 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 FAM153AQ9UHL3 310 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 SERTAD3Q9UJW9 196 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 COLEC10Q9Y6Z7 277 aa16.39■□□□□ 0.21
SCRN1-203ENST00000409570 A0A1W2PQJ5 194 aa16.38■□□□□ 0.21
SCRN1-203ENST00000409570 GSAPA4D1B5 854 aa16.38■□□□□ 0.21
SCRN1-203ENST00000409570 E7EQ34 232 aa16.38■□□□□ 0.21
SCRN1-203ENST00000409570 MASP2O00187 686 aa16.38■□□□□ 0.21
SCRN1-203ENST00000409570 MATN2O00339 956 aa16.38■□□□□ 0.21
SCRN1-203ENST00000409570 BTN3A3O00478 584 aa16.38■□□□□ 0.21
SCRN1-203ENST00000409570 LDB2O43679 373 aa16.38■□□□□ 0.21
SCRN1-203ENST00000409570 SGTAO43765 313 aa16.38■□□□□ 0.21
SCRN1-203ENST00000409570 CBSLP0DN79 551 aa16.38■□□□□ 0.21
SCRN1-203ENST00000409570 AGXTP21549 392 aa16.38■□□□□ 0.21
SCRN1-203ENST00000409570 AKT1P31749 480 aa16.38■□□□□ 0.21
SCRN1-203ENST00000409570 CBSP35520 551 aa16.38■□□□□ 0.21
SCRN1-203ENST00000409570 GSE1Q14687 1217 aa16.38■□□□□ 0.21
SCRN1-203ENST00000409570 LLGL1Q15334 1064 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms