RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 CTRB1P17538 263 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 ITGAXP20702 1163 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 MAPK4P31152 587 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 MSX2P35548 267 aaPredicted RBP5.41□□□□□ -1.54
CLK1-202ENST00000409403 FMO5P49326 533 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 NDST2P52849 883 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 AP3M2P53677 418 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 TPTEP56180 551 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 BST1Q10588 318 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 FOXL1Q12952 345 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 IKQ13123 557 aaPredicted RBP5.41□□□□□ -1.54
CLK1-202ENST00000409403 SLC13A2Q13183 592 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 DAG1Q14118 895 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 TEX44Q53QW1 395 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 MDH1BQ5I0G3 518 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 AARS2Q5JTZ9 985 aaKnown RBP5.41□□□□□ -1.54
CLK1-202ENST00000409403 PPM1LQ5SGD2 360 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 NDUFAF5Q5TEU4 345 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 CTRB2Q6GPI1 263 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 ERAP2Q6P179 960 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 IDO2Q6ZQW0 420 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 PLEKHG7Q6ZR37 379 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 CYP4V2Q6ZWL3 525 aaPredicted RBP5.41□□□□□ -1.54
CLK1-202ENST00000409403 LACC1Q8IV20 430 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 PALM2Q8IXS6 379 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 HACE1Q8IYU2 909 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 CADM3Q8N126 398 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 D2HGDHQ8N465 521 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 SLC15A4Q8N697 577 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 ASCC1Q8N9N2 400 aaKnown RBP5.41□□□□□ -1.54
CLK1-202ENST00000409403 PCSK9Q8NBP7 692 aaKnown RBP5.41□□□□□ -1.54
CLK1-202ENST00000409403 SIMC1Q8NDZ2 872 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 VPS37AQ8NEZ2 397 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.41□□□□□ -1.54
CLK1-202ENST00000409403 PDCD6IPQ8WUM4 868 aaKnown RBP5.41□□□□□ -1.54
CLK1-202ENST00000409403 DCAKDQ8WVC6 231 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 HSPH1Q92598 858 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 CEP19Q96LK0 163 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 KCNC2Q96PR1 638 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 COQ7Q99807 217 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 CPEB1Q9BZB8 566 aaKnown RBP5.41□□□□□ -1.54
CLK1-202ENST00000409403 HOXD1Q9GZZ0 328 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 LIN28AQ9H9Z2 209 aaKnown RBP5.41□□□□□ -1.54
CLK1-202ENST00000409403 CYP4F11Q9HBI6 524 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 GPR35Q9HC97 309 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 ANKHQ9HCJ1 492 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 XAB2Q9HCS7 855 aaKnown RBP5.41□□□□□ -1.54
CLK1-202ENST00000409403 SACM1LQ9NTJ5 587 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 SLC45A2Q9UMX9 530 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.41□□□□□ -1.54
CLK1-202ENST00000409403 ANKRD17O75179 2603 aaKnown RBP5.41□□□□□ -1.54
CLK1-202ENST00000409403 MN1Q10571 1320 aaPredicted RBP5.41□□□□□ -1.54
CLK1-202ENST00000409403 ATG2AQ2TAZ0 1938 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 C1orf232A0A0U1RR37 186 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 TRIM64A6NGJ6 449 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 SAGE2PA6NJ88 616 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 TSPY2A6NKD2 308 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.4□□□□□ -1.54
CLK1-202ENST00000409403 BCAS2O75934 225 aaPredicted RBP5.4□□□□□ -1.54
CLK1-202ENST00000409403 AGFG2O95081 481 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 ABHD16AO95870 558 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 PLATP00750 562 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 THP07101 528 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 SNRPAP09012 282 aaKnown RBP5.4□□□□□ -1.54
CLK1-202ENST00000409403 KRT10P13645 584 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 POLR2CP19387 275 aaPredicted RBP5.4□□□□□ -1.54
CLK1-202ENST00000409403 ME2P23368 584 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 IL12AP29459 219 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 AVPR2P30518 371 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 NAMPTP43490 491 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 NME5P56597 212 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 ECT2LQ008S8 904 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 NIPAL4Q0D2K0 466 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 GALNT2Q10471 571 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 SELENBP1Q13228 472 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 RFTN1Q14699 578 aaPredicted RBP5.4□□□□□ -1.54
CLK1-202ENST00000409403 MAPRE1Q15691 268 aaKnown RBP5.4□□□□□ -1.54
CLK1-202ENST00000409403 CHI3L2Q15782 390 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 CSRP2Q16527 193 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 FAM209BQ5JX69 171 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 RNASEH2BQ5TBB1 312 aaKnown RBP5.4□□□□□ -1.54
CLK1-202ENST00000409403 PDPK2PQ6A1A2 396 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 KIF6Q6ZMV9 814 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 USP43Q70EL4 1123 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 ADAMTSL2Q86TH1 951 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 PRUNE1Q86TP1 453 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 HPS6Q86YV9 775 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 ARMC8Q8IUR7 673 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 LIX1LQ8IVB5 337 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 KATNAL2Q8IYT4 538 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 PDIK1LQ8N165 341 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 BEST2Q8NFU1 509 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 EXD1Q8NHP7 514 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 HCAR2Q8TDS4 363 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 TBCKQ8TEA7 893 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 SLC44A1Q8WWI5 657 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 CDKL2Q92772 493 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 EDAQ92838 391 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 PEX13Q92968 403 aa5.4□□□□□ -1.54
CLK1-202ENST00000409403 ATP2A3Q93084 1043 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms