RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 TMC5Q6UXY8 1006 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 Q6ZVU0 165 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 AMZ2Q86W34 360 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 DEPDC4Q8N2C3 294 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 GPR156Q8NFN8 814 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 ARNTL2Q8WYA1 636 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 TPD52L3Q96J77 140 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 CYP2S1Q96SQ9 504 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 WRAP53Q9BUR4 548 aaKnown RBP4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 ATG10Q9H0Y0 220 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 RPS6KB2Q9UBS0 482 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 SBF2Q86WG5 1849 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 KLHL33A6NCF5 533 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SOBPA7XYQ1 873 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SUV39H1O43463 412 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 ANXA4P09525 319 aaPredicted RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SLC35E2BP0CK96 405 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 GJA1P17302 382 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 PRPS1L1P21108 318 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 FDXRP22570 491 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SP100P23497 879 aaPredicted RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 CMPK1P30085 196 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 HOXC13P31276 330 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 HMGCLP35914 325 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 RPL5P46777 297 aaKnown RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 NR1H2P55055 460 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 PRKCQQ04759 706 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 GRSF1Q12849 480 aaKnown RBP eCLIP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 TMED1Q13445 227 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 LRRC66Q68CR7 880 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 GRASPQ7Z6J2 395 aaPredicted RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 HIPK1Q86Z02 1210 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 PLD6Q8N2A8 252 aaKnown RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 CBARPQ8N350 705 aaPredicted RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 TMEM130Q8N3G9 435 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SFRP1Q8N474 314 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 TTLQ8NG68 377 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 PHOSPHO2Q8TCD6 241 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SLC13A3Q8WWT9 602 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 KHSRPQ92945 711 aaKnown RBP eCLIP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 RERGQ96A58 199 aaPredicted RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 ZNF607Q96SK3 696 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 ZNF382Q96SR6 550 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 RIOK2Q9BVS4 552 aaKnown RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 KLF16Q9BXK1 252 aaPredicted RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 MRPS26Q9BYN8 205 aaKnown RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 ROGDIQ9GZN7 287 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SEMA6AQ9H2E6 1030 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 AKTIPQ9H8T0 292 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SFXN1Q9H9B4 322 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 C3orf14Q9HBI5 128 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 B4GALT6Q9UBX8 382 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 ATP6V1HQ9UI12 483 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 ZDHHC2Q9UIJ5 367 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 PACSIN3Q9UKS6 424 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 DUSP12Q9UNI6 340 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 KLHL20Q9Y2M5 609 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 COPG1Q9Y678 874 aaKnown RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 WNT6Q9Y6F9 365 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 TTC24A2A3L6 582 aaPredicted RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SYNDIG1LA6NDD5 238 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 CAPN8A6NHC0 703 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 CDC7O00311 574 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 NBNO60934 754 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SNNO75324 88 aaPredicted RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 NTRK1P04629 796 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 FYNP06241 537 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 CD1DP15813 335 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 AMD1P17707 334 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SLC6A2P23975 617 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 MTHFRP42898 656 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SSR2P43308 183 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 CSNK1DP48730 415 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 RPS6KA3P51812 740 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 EMX2Q04743 252 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 C1DQ13901 141 aaKnown RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 KHDC1Q4VXA5 237 aaKnown RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 PDCD4Q53EL6 469 aaKnown RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 ZNF805Q5CZA5 627 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 GPRC6AQ5T6X5 926 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 ZNF776Q68DI1 518 aaPredicted RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 PAOXQ6QHF9 649 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 VITQ6UXI7 678 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 CASP12Q6UXS9 341 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 CDHR3Q6ZTQ4 885 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 FAM92BQ6ZTR7 304 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SLC30A8Q8IWU4 369 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 SAMD14Q8IZD0 417 aaPredicted RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 TRAM1L1Q8N609 369 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 OR14C36Q8NHC7 312 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 MAGEE2Q8TD90 523 aaPredicted RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 CENPNQ96H22 339 aaPredicted RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 PPM1MQ96MI6 270 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 OR52B2Q96RD2 323 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 TRMT61BQ9BVS5 477 aaKnown RBP4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 ALG2Q9H553 416 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 ZBTB26Q9HCK0 441 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 HPS4Q9NQG7 708 aa4.66□□□□□ -1.66
PCDH11X-207ENST00000406881 KRT84Q9NSB2 600 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms