RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 PJA1Q8NG27 643 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 HIPK3Q9H422 1215 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 PAK1IP1Q9NWT1 392 aaPredicted RBP9.68□□□□□ -0.86
MSH2-202ENST00000406134 GALNT8Q9NY28 637 aa9.68□□□□□ -0.86
MSH2-202ENST00000406134 TSR3Q9UJK0 312 aaKnown RBP9.68□□□□□ -0.86
MSH2-202ENST00000406134 FCF1Q9Y324 198 aaKnown RBP9.68□□□□□ -0.86
MSH2-202ENST00000406134 A0A1B0GVM2 712 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 A0A1W2PQ45 241 aaPredicted RBP9.67□□□□□ -0.86
MSH2-202ENST00000406134 A0A1W2PQY0 241 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 SCAMP3O14828 347 aaKnown RBP9.67□□□□□ -0.86
MSH2-202ENST00000406134 FFAR2O15552 330 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 RHOCP08134 193 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 KPNA1P52294 538 aaPredicted RBP9.67□□□□□ -0.86
MSH2-202ENST00000406134 MAP7D1Q3KQU3 841 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 ATP6AP1LQ52LC2 224 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 SLC44A4Q53GD3 710 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 LAIR1Q6GTX8 287 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 IL27RAQ6UWB1 636 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 MBOAT1Q6ZNC8 495 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 KCTD8Q6ZWB6 473 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 CALHM3Q86XJ0 350 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 PROSER1Q86XN7 944 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 KRTCAP2Q8N6L1 136 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 PLD4Q96BZ4 506 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 GORASP2Q9H8Y8 452 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 CD274Q9NZQ7 290 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 ZNF232Q9UNY5 417 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 ERVK-11Q9UQG0 969 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 OARD1Q9Y530 152 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 NUP210Q8TEM1 1887 aaPredicted RBP9.67□□□□□ -0.86
MSH2-202ENST00000406134 H0YAE9 185 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 CLOCKO15516 846 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 SMAD6O43541 496 aaKnown RBP9.67□□□□□ -0.86
MSH2-202ENST00000406134 SEC14L2O76054 403 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 FCGR1AP12314 374 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 CTPS1P17812 591 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 SLC14A1Q13336 389 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 PWP1Q13610 501 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 ADGRF1Q5T601 910 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 GPRC6AQ5T6X5 926 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 ABRAXAS1Q6UWZ7 409 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 BBS5Q8N3I7 341 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 FKBP10Q96AY3 582 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 C17orf80Q9BSJ5 609 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 CLMPQ9H6B4 373 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 CXorf21Q9HAI6 301 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 C8orf4Q9NR00 106 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 VNN3Q9NY84 501 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 IFT80Q9P2H3 777 aaPredicted RBP9.67□□□□□ -0.86
MSH2-202ENST00000406134 CLEC4EQ9ULY5 219 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 FNDC3AQ9Y2H6 1198 aaKnown RBP9.67□□□□□ -0.86
MSH2-202ENST00000406134 PRAMEF4O60810 478 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 JUNBP17275 347 aaPredicted RBP9.67□□□□□ -0.86
MSH2-202ENST00000406134 RPS3P23396 243 aaKnown RBP eCLIP9.67□□□□□ -0.861e-6■■■■■ 31.9
MSH2-202ENST00000406134 GKP32189 559 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 CASP2P42575 452 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 PIK3CGP48736 1102 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 HSPA7P48741 367 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 ALDH3A2P51648 485 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 NAA20P61599 178 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 CACNG1Q06432 222 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 GRSF1Q12849 480 aaKnown RBP eCLIP9.67□□□□□ -0.86
MSH2-202ENST00000406134 PRKG2Q13237 762 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 PRAMEF9Q5VWM5 478 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 DET1Q7L5Y6 550 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 GPR155Q7Z3F1 870 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 TRIM46Q7Z4K8 759 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 GPR141Q7Z602 305 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 CLDN19Q8N6F1 224 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 DBF4BQ8NFT6 615 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 OR8J3Q8NGG0 315 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 C2orf15Q8WU43 125 aaKnown RBP9.67□□□□□ -0.86
MSH2-202ENST00000406134 UBTD2Q8WUN7 234 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 FBLIM1Q8WUP2 373 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 USP7Q93009 1102 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 VWCEQ96DN2 955 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 RNF145Q96MT1 663 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 CLSTN3Q9BQT9 956 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 FEM1AQ9BSK4 669 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 LMCD1Q9NZU5 365 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 MTRRQ9UBK8 725 aa9.67□□□□□ -0.86
MSH2-202ENST00000406134 TMEFF2Q9UIK5 374 aaPredicted RBP9.67□□□□□ -0.86
MSH2-202ENST00000406134 KCNE1BA0A087WTH5 132 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 A0A1W2PPW3 197 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 AGAP14A8MT82 685 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 TPD52L2O43399 206 aaKnown RBP9.66□□□□□ -0.86
MSH2-202ENST00000406134 KATNA1O75449 491 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 NRIP1P48552 1158 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 B4GALNT1Q00973 533 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 DCTN2Q13561 401 aaKnown RBP9.66□□□□□ -0.86
MSH2-202ENST00000406134 LAPTM5Q13571 262 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 AP5B1Q2VPB7 878 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 USP39Q53GS9 565 aaKnown RBP9.66□□□□□ -0.86
MSH2-202ENST00000406134 Q6ZNB5 142 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 ABI1Q8IZP0 508 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 PCSK9Q8NBP7 692 aaKnown RBP9.66□□□□□ -0.86
MSH2-202ENST00000406134 OVCA2Q8WZ82 227 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 VPS50Q96JG6 964 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 CIPCQ9C0C6 399 aa9.66□□□□□ -0.86
MSH2-202ENST00000406134 PAIP1Q9H074 479 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms