RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 ATXN10Q9UBB4 475 aa25.12■■□□□ 1.61
CPNE1-205ENST00000401607 GULP1Q9UBP9 304 aa25.12■■□□□ 1.61
CPNE1-205ENST00000401607 SLC5A10A0PJK1 596 aa25.11■■□□□ 1.61
CPNE1-205ENST00000401607 GFYI3L273 518 aa25.11■■□□□ 1.61
CPNE1-205ENST00000401607 CPA2P48052 419 aa25.11■■□□□ 1.61
CPNE1-205ENST00000401607 RPIAP49247 311 aa25.11■■□□□ 1.61
CPNE1-205ENST00000401607 MRPS21P82921 87 aaKnown RBP25.11■■□□□ 1.61
CPNE1-205ENST00000401607 SP140Q13342 867 aa25.11■■□□□ 1.61
CPNE1-205ENST00000401607 AGERQ15109 404 aa25.11■■□□□ 1.61
CPNE1-205ENST00000401607 WSCD2Q2TBF2 565 aa25.11■■□□□ 1.61
CPNE1-205ENST00000401607 ADAMTSL4Q6UY14 1074 aa25.11■■□□□ 1.61
CPNE1-205ENST00000401607 RINLQ6ZS11 566 aa25.11■■□□□ 1.61
CPNE1-205ENST00000401607 TRMT11Q7Z4G4 463 aaKnown RBP25.11■■□□□ 1.61
CPNE1-205ENST00000401607 LILRA3Q8N6C8 439 aaPredicted RBP25.11■■□□□ 1.61
CPNE1-205ENST00000401607 C19orf60Q96EN9 201 aa25.11■■□□□ 1.61
CPNE1-205ENST00000401607 COX14Q96I36 57 aa25.11■■□□□ 1.61
CPNE1-205ENST00000401607 LENG8Q96PV6 779 aaPredicted RBP25.11■■□□□ 1.61
CPNE1-205ENST00000401607 PARVBQ9HBI1 364 aa25.11■■□□□ 1.61
CPNE1-205ENST00000401607 WWOXQ9NZC7 414 aa25.11■■□□□ 1.61
CPNE1-205ENST00000401607 ZFR2Q9UPR6 939 aaKnown RBP25.11■■□□□ 1.61
CPNE1-205ENST00000401607 SLC16A5O15375 505 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 KRT16P08779 473 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 CDKL1Q00532 357 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 KLF10Q13118 480 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 SYTL3Q4VX76 610 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 CDKL4Q5MAI5 379 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 PNCKQ6P2M8 343 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 CPSF7Q8N684 471 aaKnown RBP25.1■■□□□ 1.61
CPNE1-205ENST00000401607 OR52B6Q8NGF0 335 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 GLMNQ92990 594 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 UTP4Q969X6 686 aaKnown RBP25.1■■□□□ 1.61
CPNE1-205ENST00000401607 C3orf30Q96M34 536 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 CATSPER2Q96P56 530 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 MIPEPQ99797 713 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 CD244Q9BZW8 370 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 TUBB1Q9H4B7 451 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 NOL11Q9H8H0 719 aaKnown RBP25.1■■□□□ 1.61
CPNE1-205ENST00000401607 SLC40A1Q9NP59 571 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 G3BP2Q9UN86 482 aaKnown RBP25.1■■□□□ 1.61
CPNE1-205ENST00000401607 OR7A17O14581 309 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 DNTTP04053 509 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 PCCBP05166 539 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 PREPP48147 710 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 GTF2H2Q13888 395 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 NAA25Q14CX7 972 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 GTF2H2CQ6P1K8 395 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 GPRIN3Q6ZVF9 776 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 HIC2Q96JB3 615 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 PTGDR2Q9Y5Y4 395 aa25.1■■□□□ 1.61
CPNE1-205ENST00000401607 PIP5K1BO14986 540 aa25.09■■□□□ 1.61
CPNE1-205ENST00000401607 PLRG1O43660 514 aaKnown RBP25.09■■□□□ 1.61
CPNE1-205ENST00000401607 MATN4O95460 622 aa25.09■■□□□ 1.61
CPNE1-205ENST00000401607 ANXA5P08758 320 aa25.09■■□□□ 1.61
CPNE1-205ENST00000401607 ZNF8P17098 575 aaPredicted RBP25.09■■□□□ 1.61
CPNE1-205ENST00000401607 PBLDP30039 288 aaPredicted RBP25.09■■□□□ 1.61
CPNE1-205ENST00000401607 GDF5P43026 501 aa25.09■■□□□ 1.61
CPNE1-205ENST00000401607 PKNOX1P55347 436 aa25.09■■□□□ 1.61
CPNE1-205ENST00000401607 FGL2Q14314 439 aa25.09■■□□□ 1.61
CPNE1-205ENST00000401607 SKIV2LQ15477 1246 aaKnown RBP25.09■■□□□ 1.61
CPNE1-205ENST00000401607 HEATR4Q86WZ0 1026 aa25.09■■□□□ 1.61
CPNE1-205ENST00000401607 TEX9Q8N6V9 391 aa25.09■■□□□ 1.61
CPNE1-205ENST00000401607 TMEM159Q96B96 161 aa25.09■■□□□ 1.61
CPNE1-205ENST00000401607 MARK4Q96L34 752 aa25.09■■□□□ 1.61
CPNE1-205ENST00000401607 TBC1D10AQ9BXI6 508 aa25.09■■□□□ 1.61
CPNE1-205ENST00000401607 ARL15Q9NXU5 204 aa25.09■■□□□ 1.61
CPNE1-205ENST00000401607 TAS2R1Q9NYW7 299 aa25.09■■□□□ 1.61
CPNE1-205ENST00000401607 TIMM22Q9Y584 194 aa25.09■■□□□ 1.61
CPNE1-205ENST00000401607 OR4F21O95013 312 aa25.08■■□□□ 1.61
CPNE1-205ENST00000401607 GSTM1P09488 218 aa25.08■■□□□ 1.61
CPNE1-205ENST00000401607 ERVPABLB-1P60509 514 aa25.08■■□□□ 1.61
CPNE1-205ENST00000401607 GSTM4Q03013 218 aa25.08■■□□□ 1.61
CPNE1-205ENST00000401607 XKR5Q6UX68 686 aa25.08■■□□□ 1.61
CPNE1-205ENST00000401607 CHSY3Q70JA7 882 aa25.08■■□□□ 1.61
CPNE1-205ENST00000401607 LARP4Q71RC2 724 aaKnown RBP eCLIP25.08■■□□□ 1.61
CPNE1-205ENST00000401607 TRAPPC5Q8IUR0 188 aa25.08■■□□□ 1.61
CPNE1-205ENST00000401607 ZNF547Q8IVP9 402 aa25.08■■□□□ 1.61
CPNE1-205ENST00000401607 FBXO27Q8NI29 283 aa25.08■■□□□ 1.61
CPNE1-205ENST00000401607 GANCQ8TET4 914 aa25.08■■□□□ 1.61
CPNE1-205ENST00000401607 PPM1EQ8WY54 764 aa25.08■■□□□ 1.61
CPNE1-205ENST00000401607 BTBD10Q9BSF8 475 aa25.08■■□□□ 1.61
CPNE1-205ENST00000401607 MBNL1Q9NR56 388 aaKnown RBP25.08■■□□□ 1.61
CPNE1-205ENST00000401607 KLC4Q9NSK0 619 aa25.08■■□□□ 1.61
CPNE1-205ENST00000401607 ST14Q9Y5Y6 855 aa25.08■■□□□ 1.61
CPNE1-205ENST00000401607 F5P12259 2224 aa25.08■■□□□ 1.61
CPNE1-205ENST00000401607 VEGFDO43915 354 aa25.08■■□□□ 1.6
CPNE1-205ENST00000401607 CCNT2O60583 730 aaKnown RBP25.08■■□□□ 1.6
CPNE1-205ENST00000401607 GTF2H3Q13889 308 aa25.08■■□□□ 1.6
CPNE1-205ENST00000401607 ZXDCQ2QGD7 858 aaPredicted RBP25.08■■□□□ 1.6
CPNE1-205ENST00000401607 LETMD1Q6P1Q0 360 aa25.08■■□□□ 1.6
CPNE1-205ENST00000401607 METTL2BQ6P1Q9 378 aaKnown RBP25.08■■□□□ 1.6
CPNE1-205ENST00000401607 SLC22A15Q8IZD6 547 aa25.08■■□□□ 1.6
CPNE1-205ENST00000401607 POU5F2Q8N7G0 328 aa25.08■■□□□ 1.6
CPNE1-205ENST00000401607 DCBLD1Q8N8Z6 715 aa25.08■■□□□ 1.6
CPNE1-205ENST00000401607 LINC00615Q96LM1 132 aaPredicted RBP25.08■■□□□ 1.6
CPNE1-205ENST00000401607 CDK15Q96Q40 435 aa25.08■■□□□ 1.6
CPNE1-205ENST00000401607 NUSAP1Q9BXS6 441 aaKnown RBP25.08■■□□□ 1.6
CPNE1-205ENST00000401607 TRIM54Q9BYV2 358 aa25.08■■□□□ 1.6
CPNE1-205ENST00000401607 OPTCQ9UBM4 332 aa25.08■■□□□ 1.6
CPNE1-205ENST00000401607 BTRCQ9Y297 605 aa25.08■■□□□ 1.6
CPNE1-205ENST00000401607 COPG1Q9Y678 874 aaKnown RBP25.08■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms