RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 VPS9D1Q9Y2B5 631 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 PTGDR2Q9Y5Y4 395 aa15.69■□□□□ 0.1
CHRFAM7A-203ENST00000401522 MYOCOSA0A1B0GUC4 107 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 DHRS12A0PJE2 317 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 H3BNH8 94 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 FXYD1O00168 92 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 STX16O14662 325 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 ASLP04424 464 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 IL10P22301 178 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 PSMA3P25788 255 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 NME5P56597 212 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 TUBA4AP68366 448 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 PRKCQQ04759 706 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 CYTH1Q15438 398 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 FUT11Q495W5 492 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 TBCELQ5QJ74 424 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 FAM219BQ5XKK7 198 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 GRAMD4Q6IC98 578 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 BLOC1S3Q6QNY0 202 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 PAQR3Q6TCH7 311 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 MFSD2AQ8NA29 543 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 SLC45A3Q96JT2 553 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 C2orf49Q9BVC5 232 aaPredicted RBP15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 C1QTNF3Q9BXJ4 246 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 IL1RL2Q9HB29 575 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 PFDN4Q9NQP4 134 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 C8orf4Q9NR00 106 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 HEBP1Q9NRV9 189 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 TMCO1Q9UM00 188 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 UBA6A0AVT1 1052 aaPredicted RBP15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 PDLIM1O00151 329 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 NDUFS3O75489 264 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 LINC00032P0C843 101 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 PIRTP0C851 137 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 PRR35P0CG20 571 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 PSMA4P25789 261 aaKnown RBP15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 CTHP32929 405 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 SOX9P48436 509 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 MESP2Q0VG99 397 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 TAF1AQ15573 450 aaPredicted RBP15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 NHSL2Q5HYW2 709 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 TMEM215Q68D42 235 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 TXNDC11Q6PKC3 985 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 CAMK1DQ8IU85 385 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 MYO1HQ8N1T3 1032 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 NKAPQ8N5F7 415 aaKnown RBP15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 WFIKKN2Q8TEU8 576 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 LRRC58Q96CX6 371 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 RMND5BQ96G75 393 aaPredicted RBP15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 KCNA7Q96RP8 456 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 CMTM6Q9NX76 183 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 GMPR2Q9P2T1 348 aaKnown RBP15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 GIMAP2Q9UG22 337 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 ARIH1Q9Y4X5 557 aaPredicted RBP15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 GPR45Q9Y5Y3 372 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 OAS3Q9Y6K5 1087 aaKnown RBP15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 PIAS3Q9Y6X2 628 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 KIAA1549LQ6ZVL6 1849 aa15.68■□□□□ 0.1
CHRFAM7A-203ENST00000401522 CBX4O00257 560 aa15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 MLYCDO95822 493 aa15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 CHEK2O96017 543 aa15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 PYGLP06737 847 aa15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 GPIP06744 558 aa15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 SLC6A2P23975 617 aa15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 FMO4P31512 558 aa15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 ALDH3B2P48448 385 aa15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 GALK1P51570 392 aa15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 TRIML2Q8N7C3 387 aa15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 TFAP2CQ92754 450 aa15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 MSANTD3Q96H12 275 aa15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 PSKH2Q96QS6 385 aa15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 P2RY13Q9BPV8 354 aa15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 CINPQ9BW66 212 aaPredicted RBP15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 SLC52A3Q9NQ40 469 aa15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 AGPAT4Q9NRZ5 378 aa15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 TMEM45AQ9NWC5 275 aa15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 VPS51Q9UID3 782 aa15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 BTRCQ9Y297 605 aa15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 MED16Q9Y2X0 877 aa15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 ANKRD36A6QL64 1941 aa15.67■□□□□ 0.1
CHRFAM7A-203ENST00000401522 A0A1W2PP18 115 aa15.66■□□□□ 0.1
CHRFAM7A-203ENST00000401522 SOCS2O14508 198 aa15.66■□□□□ 0.1
CHRFAM7A-203ENST00000401522 PFDN6O15212 129 aa15.66■□□□□ 0.1
CHRFAM7A-203ENST00000401522 KLK8O60259 260 aa15.66■□□□□ 0.1
CHRFAM7A-203ENST00000401522 FCGR1AP12314 374 aa15.66■□□□□ 0.1
CHRFAM7A-203ENST00000401522 CKMT2P17540 419 aa15.66■□□□□ 0.1
CHRFAM7A-203ENST00000401522 ARF5P84085 180 aa15.66■□□□□ 0.1
CHRFAM7A-203ENST00000401522 SLC44A4Q53GD3 710 aa15.66■□□□□ 0.1
CHRFAM7A-203ENST00000401522 SETMARQ53H47 684 aaPredicted RBP15.66■□□□□ 0.1
CHRFAM7A-203ENST00000401522 RETSATQ6NUM9 610 aa15.66■□□□□ 0.1
CHRFAM7A-203ENST00000401522 TERB1Q8NA31 727 aa15.66■□□□□ 0.1
CHRFAM7A-203ENST00000401522 C9orf16Q9BUW7 83 aa15.66■□□□□ 0.1
CHRFAM7A-203ENST00000401522 CLK4Q9HAZ1 481 aaKnown RBP15.66■□□□□ 0.1
CHRFAM7A-203ENST00000401522 OLAHQ9NV23 265 aa15.66■□□□□ 0.1
CHRFAM7A-203ENST00000401522 AIG1Q9NVV5 245 aa15.66■□□□□ 0.1
CHRFAM7A-203ENST00000401522 UBA2Q9UBT2 640 aaPredicted RBP15.66■□□□□ 0.1
CHRFAM7A-203ENST00000401522 SLC8A2Q9UPR5 921 aa15.66■□□□□ 0.1
CHRFAM7A-203ENST00000401522 PCDHA9Q9Y5H5 950 aa15.66■□□□□ 0.1
CHRFAM7A-203ENST00000401522 SPO11Q9Y5K1 396 aa15.66■□□□□ 0.1
CHRFAM7A-203ENST00000401522 CEPT1Q9Y6K0 416 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms