RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 DCP2Q8IU60 420 aaKnown RBP13.77□□□□□ -0.21
APOB-202ENST00000399256 TMEM86AQ8N2M4 240 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 ZNF548Q8NEK5 533 aaPredicted RBP13.77□□□□□ -0.21
APOB-202ENST00000399256 ARRDC2Q8TBH0 407 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 CAPSLQ8WWF8 208 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 ZNF300Q96RE9 604 aaPredicted RBP13.77□□□□□ -0.21
APOB-202ENST00000399256 TAS2R13Q9NYV9 303 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 CD274Q9NZQ7 290 aa13.77□□□□□ -0.21
APOB-202ENST00000399256 TMEFF2Q9UIK5 374 aaPredicted RBP13.77□□□□□ -0.21
APOB-202ENST00000399256 CCDC159P0C7I6 412 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 MASP1P48740 699 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 HK3P52790 923 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 ACOX1Q15067 660 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 THOC7Q6I9Y2 204 aaKnown RBP13.76□□□□□ -0.21
APOB-202ENST00000399256 LETMD1Q6P1Q0 360 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 PRR23BQ6ZRT6 265 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 AKAP14Q86UN6 197 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 CLIP4Q8N3C7 705 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 ARL10Q8N8L6 244 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 GIPC2Q8TF65 315 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 PHF10Q8WUB8 498 aaKnown RBP13.76□□□□□ -0.21
APOB-202ENST00000399256 GAD1Q99259 594 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 SEMA3CQ99985 751 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 RTP3Q9BQQ7 232 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 DSN1Q9H410 356 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 RIBC2Q9H4K1 309 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 GORASP2Q9H8Y8 452 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 KLHL3Q9UH77 587 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 ORC6Q9Y5N6 252 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 LCHNA4D1U4 455 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 CXCR6O00574 342 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 MT-ND2P03891 347 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 CYP11A1P05108 521 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 ALDH7A1P49419 539 aaKnown RBP13.76□□□□□ -0.21
APOB-202ENST00000399256 HNRNPFP52597 415 aaKnown RBP13.76□□□□□ -0.21
APOB-202ENST00000399256 CYP4F3Q08477 520 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 VAC14Q08AM6 782 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 CLCA4Q14CN2 919 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 C18orf21Q32NC0 220 aaPredicted RBP13.76□□□□□ -0.21
APOB-202ENST00000399256 ALFQ53S48 1182 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 DET1Q7L5Y6 550 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 PLD3Q8IV08 490 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 PHACTR4Q8IZ21 702 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 GPR150Q8NGU9 434 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 OR5K1Q8NHB7 308 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 RHBDF1Q96CC6 855 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 MIR1-1HGQ9H1L0 117 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 TRIT1Q9H3H1 467 aaKnown RBP13.76□□□□□ -0.21
APOB-202ENST00000399256 PCDHB14Q9Y5E9 798 aa13.76□□□□□ -0.21
APOB-202ENST00000399256 KATNA1O75449 491 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 NDST3O95803 873 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 SNAI1O95863 264 aaPredicted RBP13.75□□□□□ -0.21
APOB-202ENST00000399256 DLGAP3O95886 979 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 CAPN1P07384 714 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 HOXB8P17481 243 aaPredicted RBP13.75□□□□□ -0.21
APOB-202ENST00000399256 HUNKP57058 714 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 SMN1Q16637 294 aaKnown RBP13.75□□□□□ -0.21
APOB-202ENST00000399256 ZNF792Q3KQV3 632 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 VARS2Q5ST30 1063 aaKnown RBP13.75□□□□□ -0.21
APOB-202ENST00000399256 CYP2U1Q7Z449 544 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 ADHFE1Q8IWW8 467 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 OR8J3Q8NGG0 315 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 METTL6Q8TCB7 284 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 LPPQ93052 612 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 CCDC115Q96NT0 180 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 SLIRPQ9GZT3 109 aaKnown RBP13.75□□□□□ -0.21
APOB-202ENST00000399256 MIOSQ9NXC5 875 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 SLC45A1Q9Y2W3 748 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 SMIM35A0A1B0GVV1 85 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 LOC285095A0A1B0GVY8 99 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 A6NL46 340 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 ARNTLO00327 626 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 PDHXO00330 501 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 STX16O14662 325 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 TBX1O43435 398 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 CNPP09543 421 aaKnown RBP13.75□□□□□ -0.21
APOB-202ENST00000399256 PCSK1P29120 753 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 RYKP34925 604 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 GGT5P36269 586 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 CDKN1CP49918 316 aaPredicted RBP13.75□□□□□ -0.21
APOB-202ENST00000399256 ACVR1Q04771 509 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 PTGR1Q14914 329 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 GTDC1Q4AE62 458 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 RFTN2Q52LD8 501 aaPredicted RBP13.75□□□□□ -0.21
APOB-202ENST00000399256 TIGD5Q53EQ6 642 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 COLEC12Q5KU26 742 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 SIDT2Q8NBJ9 832 aaKnown RBP13.75□□□□□ -0.21
APOB-202ENST00000399256 HASPINQ8TF76 798 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 TRIB2Q92519 343 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 BARD1Q99728 777 aaKnown RBP13.75□□□□□ -0.21
APOB-202ENST00000399256 KATNBL1Q9H079 304 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 EPS8L2Q9H6S3 715 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 HEBP1Q9NRV9 189 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 ABCC13Q9NSE7 274 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 THG1LQ9NWX6 298 aaKnown RBP13.75□□□□□ -0.21
APOB-202ENST00000399256 VNN3Q9NY84 501 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 FNDC3AQ9Y2H6 1198 aaKnown RBP13.75□□□□□ -0.21
APOB-202ENST00000399256 TMEM98Q9Y2Y6 226 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 NOX1Q9Y5S8 564 aa13.75□□□□□ -0.21
APOB-202ENST00000399256 ELOVL7A1L3X0 281 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms