RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 MAPK9P45984 424 aa17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ZFP36L2P47974 494 aaKnown RBP17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 RALGDSQ12967 914 aa17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 MAP7Q14244 749 aa17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 HID1Q8IV36 788 aa17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ANKFN1Q8N957 763 aa17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 FAM156AQ8NDB6 213 aa17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 TTC16Q8NEE8 873 aa17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 PHOSPHO2Q8TCD6 241 aa17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 TMEM125Q96AQ2 219 aa17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 ZBTB18Q99592 522 aa17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 HEPHQ9BQS7 1158 aa17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 OSBPL11Q9BXB4 747 aa17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 SLC32A1Q9H598 525 aa17.4■□□□□ 0.38
HLA-DQB1-204ENST00000399084 A0A0U1RQS6 177 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 PABPN1LA6NDY0 278 aaKnown RBP17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 KRT6AP02538 564 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 KRT6BP04259 564 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 HIST1H2AGP0C0S8 130 aaPredicted RBP17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 C7P10643 843 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 HIST1H2ADP20671 130 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 PSMA4P25789 261 aaKnown RBP17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 AOAHP28039 575 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 HTR1EP28566 365 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 CTSOP43234 321 aaPredicted RBP17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 KRT6CP48668 564 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 AP1S2P56377 157 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 AP5B1Q2VPB7 878 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 GGTA1PQ4G0N0 100 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 LRRC70Q7Z2Q7 622 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 TSPAN33Q86UF1 283 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 SFRP1Q8N474 314 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 HIST1H2AHQ96KK5 128 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 GBP5Q96PP8 586 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 HIST1H2AJQ99878 128 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 H2AFJQ9BTM1 129 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ZDHHC6Q9H6R6 413 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 PARVBQ9HBI1 364 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 CMTM6Q9NX76 183 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 DKK3Q9UBP4 350 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 GIMAP2Q9UG22 337 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ASB1Q9Y576 335 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 SNX13Q9Y5W8 968 aa17.39■□□□□ 0.37
HLA-DQB1-204ENST00000399084 SERTM1A2A2V5 107 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ZBBXA8MT70 800 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 GPR39O43194 453 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ASLP04424 464 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 SRPRAP08240 638 aaKnown RBP17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 UBTFL6P0CB48 400 aaPredicted RBP17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 TYRP14679 529 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ZNF26P17031 533 aaPredicted RBP17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 GJA1P17302 382 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 HOXB6P17509 224 aaKnown RBP17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 POLR2EP19388 210 aaKnown RBP17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 VIPR1P32241 457 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ARL1P40616 181 aaPredicted RBP17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 CCR2P41597 374 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 GNPDA1P46926 289 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 HSPA7P48741 367 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 STK19P49842 368 aaPredicted RBP17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 UFM1P61960 85 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 KCNC3Q14003 757 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 NR6A1Q15406 480 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ATP13A5Q4VNC0 1218 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 UGT2A3Q6UWM9 527 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 LKAAEAR1Q8TD35 194 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 SLC22A17Q8WUG5 538 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ESAMQ96AP7 390 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ZNF597Q96LX8 424 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 CENPKQ9BS16 269 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 CCL27Q9Y4X3 112 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 DHRS12A0PJE2 317 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 NEDD8-MDP1E9PL57 170 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 NPIPB8E9PQR5 432 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 MOSPD3O75425 235 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 CLDN9O95484 217 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 UGT2B4P06133 528 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 RHOP08100 348 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ATP1B2P14415 290 aaPredicted RBP17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ACPPP15309 386 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 WEE1P30291 646 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 RPIAP49247 311 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 NME5P56597 212 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ERVFC1P60507 584 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 TEAD2Q15562 447 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ZNF77Q15935 545 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 FBXO48Q5FWF7 155 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 MTX3Q5HYI7 312 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 CACHD1Q5VU97 1274 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 CYP20A1Q6UW02 462 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ERMP1Q7Z2K6 904 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ADIPOR2Q86V24 386 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 OR2A12Q8NGT7 310 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 WFIKKN2Q8TEU8 576 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 SLCO4A1Q96BD0 722 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 SH3GL1Q99961 368 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 FAM83CQ9BQN1 747 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ALG2Q9H553 416 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 ELOVL2Q9NXB9 296 aa17.38■□□□□ 0.37
HLA-DQB1-204ENST00000399084 B4GALT6Q9UBX8 382 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 584 ms