RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 B4GALNT4Q76KP1 1039 aa13.99□□□□□ -0.17
RAB1A-201ENST00000398529 ZC3H18Q86VM9 953 aaKnown RBP13.99□□□□□ -0.17
RAB1A-201ENST00000398529 AMZ2Q86W34 360 aa13.99□□□□□ -0.17
RAB1A-201ENST00000398529 PIAS4Q8N2W9 510 aaPredicted RBP13.99□□□□□ -0.17
RAB1A-201ENST00000398529 GPR26Q8NDV2 337 aa13.99□□□□□ -0.17
RAB1A-201ENST00000398529 ACTRT1Q8TDG2 376 aa13.99□□□□□ -0.17
RAB1A-201ENST00000398529 TFB1MQ8WVM0 346 aaKnown RBP13.99□□□□□ -0.17
RAB1A-201ENST00000398529 PNPLA2Q96AD5 504 aa13.99□□□□□ -0.17
RAB1A-201ENST00000398529 C5orf34Q96MH7 638 aa13.99□□□□□ -0.17
RAB1A-201ENST00000398529 QKIQ96PU8 341 aaKnown RBP eCLIP13.99□□□□□ -0.172e-7■■□□□ 13.9
RAB1A-201ENST00000398529 FAM118BQ9BPY3 351 aa13.99□□□□□ -0.17
RAB1A-201ENST00000398529 TUBB2BQ9BVA1 445 aa13.99□□□□□ -0.17
RAB1A-201ENST00000398529 MFRPQ9BY79 579 aa13.99□□□□□ -0.17
RAB1A-201ENST00000398529 SOHLH2Q9NX45 425 aa13.99□□□□□ -0.17
RAB1A-201ENST00000398529 GPR83Q9NYM4 423 aa13.99□□□□□ -0.17
RAB1A-201ENST00000398529 NFKBIL1Q9UBC1 381 aaPredicted RBP13.99□□□□□ -0.17
RAB1A-201ENST00000398529 HIVEP3Q5T1R4 2406 aa13.99□□□□□ -0.17
RAB1A-201ENST00000398529 TLCD2A6NGC4 264 aa13.98□□□□□ -0.17
RAB1A-201ENST00000398529 A6NL46 340 aa13.98□□□□□ -0.17
RAB1A-201ENST00000398529 PGRMC1O00264 195 aaKnown RBP13.98□□□□□ -0.17
RAB1A-201ENST00000398529 KLHL41O60662 606 aa13.98□□□□□ -0.17
RAB1A-201ENST00000398529 MTX2O75431 263 aa13.98□□□□□ -0.17
RAB1A-201ENST00000398529 RBP3P10745 1247 aa13.98□□□□□ -0.17
RAB1A-201ENST00000398529 BRAFP15056 766 aa13.98□□□□□ -0.17
RAB1A-201ENST00000398529 PTGIRP43119 386 aa13.98□□□□□ -0.17
RAB1A-201ENST00000398529 TMEM115Q12893 351 aaPredicted RBP13.98□□□□□ -0.17
RAB1A-201ENST00000398529 MRPL49Q13405 166 aaKnown RBP13.98□□□□□ -0.17
RAB1A-201ENST00000398529 PRKD1Q15139 912 aaPredicted RBP13.98□□□□□ -0.17
RAB1A-201ENST00000398529 IZUMO3Q5VZ72 239 aa13.98□□□□□ -0.17
RAB1A-201ENST00000398529 MED25Q71SY5 747 aa13.98□□□□□ -0.17
RAB1A-201ENST00000398529 TMC3Q7Z5M5 1100 aa13.98□□□□□ -0.17
RAB1A-201ENST00000398529 OOSP2Q86WS3 158 aa13.98□□□□□ -0.17
RAB1A-201ENST00000398529 CDKL3Q8IVW4 592 aaPredicted RBP13.98□□□□□ -0.17
RAB1A-201ENST00000398529 BEND7Q8N7W2 519 aaPredicted RBP13.98□□□□□ -0.17
RAB1A-201ENST00000398529 TMEM102Q8N9M5 508 aaPredicted RBP13.98□□□□□ -0.17
RAB1A-201ENST00000398529 CPT1BQ92523 772 aa13.98□□□□□ -0.17
RAB1A-201ENST00000398529 CLIP3Q96DZ5 547 aa13.98□□□□□ -0.17
RAB1A-201ENST00000398529 RUFY1Q96T51 708 aa13.98□□□□□ -0.17
RAB1A-201ENST00000398529 NAP1L3Q99457 506 aaPredicted RBP13.98□□□□□ -0.17
RAB1A-201ENST00000398529 MAP3K3Q99759 626 aa13.98□□□□□ -0.17
RAB1A-201ENST00000398529 FRMD8P1Q9BZ68 369 aaPredicted RBP13.98□□□□□ -0.17
RAB1A-201ENST00000398529 SLC7A5P2Q9GIP4 190 aa13.98□□□□□ -0.17
RAB1A-201ENST00000398529 HRASLS2Q9NWW9 162 aa13.98□□□□□ -0.17
RAB1A-201ENST00000398529 LUZP4Q9P127 313 aa13.98□□□□□ -0.17
RAB1A-201ENST00000398529 SEMA5BQ9P283 1151 aa13.98□□□□□ -0.17
RAB1A-201ENST00000398529 ZNF711Q9Y462 761 aa13.98□□□□□ -0.17
RAB1A-201ENST00000398529 ZBTB11O95625 1053 aaPredicted RBP13.97□□□□□ -0.17
RAB1A-201ENST00000398529 RAB40ALP0C0E4 278 aa13.97□□□□□ -0.17
RAB1A-201ENST00000398529 PIRTP0C851 137 aa13.97□□□□□ -0.17
RAB1A-201ENST00000398529 DCTP40126 519 aa13.97□□□□□ -0.17
RAB1A-201ENST00000398529 PRKAA1Q13131 559 aa13.97□□□□□ -0.17
RAB1A-201ENST00000398529 IL10RAQ13651 578 aa13.97□□□□□ -0.17
RAB1A-201ENST00000398529 PCSK7Q16549 785 aa13.97□□□□□ -0.17
RAB1A-201ENST00000398529 ZDHHC20Q5W0Z9 365 aa13.97□□□□□ -0.17
RAB1A-201ENST00000398529 ZNF787Q6DD87 383 aa13.97□□□□□ -0.17
RAB1A-201ENST00000398529 DARS2Q6PI48 645 aaKnown RBP13.97□□□□□ -0.17
RAB1A-201ENST00000398529 ZNF547Q8IVP9 402 aa13.97□□□□□ -0.17
RAB1A-201ENST00000398529 IQCKQ8N0W5 287 aa13.97□□□□□ -0.17
RAB1A-201ENST00000398529 CARFQ8N187 725 aa13.97□□□□□ -0.17
RAB1A-201ENST00000398529 D2HGDHQ8N465 521 aa13.97□□□□□ -0.17
RAB1A-201ENST00000398529 SLC35B2Q8TB61 432 aa13.97□□□□□ -0.17
RAB1A-201ENST00000398529 C1orf54Q8WWF1 131 aa13.97□□□□□ -0.17
RAB1A-201ENST00000398529 ATG4AQ8WYN0 398 aa13.97□□□□□ -0.17
RAB1A-201ENST00000398529 SGSM3Q96HU1 749 aa13.97□□□□□ -0.17
RAB1A-201ENST00000398529 CAPZA3Q96KX2 299 aa13.97□□□□□ -0.17
RAB1A-201ENST00000398529 VPS35Q96QK1 796 aa13.97□□□□□ -0.17
RAB1A-201ENST00000398529 CHST8Q9H2A9 424 aa13.97□□□□□ -0.17
RAB1A-201ENST00000398529 AKIRIN1Q9H9L7 192 aaPredicted RBP13.97□□□□□ -0.17
RAB1A-201ENST00000398529 SMARCAL1Q9NZC9 954 aa13.97□□□□□ -0.17
RAB1A-201ENST00000398529 SLC5A6Q9Y289 635 aa13.97□□□□□ -0.17
RAB1A-201ENST00000398529 KCNK1O00180 336 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 LIASO43766 372 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 CEACAM4O75871 244 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 ALPPP05187 535 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 MMP2P08253 660 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 BPIP17213 487 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 RBL1P28749 1068 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 PPP1CAP62136 330 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 IFI35P80217 286 aaPredicted RBP13.96□□□□□ -0.17
RAB1A-201ENST00000398529 CDK18Q07002 472 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 SNX1Q13596 522 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 KRT33BQ14525 404 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 RPE65Q16518 533 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 CCNG2Q16589 344 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 KYNUQ16719 465 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 SLC6A19Q695T7 634 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 RAB43Q86YS6 212 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 CREG2Q8IUH2 290 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 ENDOVQ8N8Q3 282 aaKnown RBP13.96□□□□□ -0.17
RAB1A-201ENST00000398529 FDCSPQ8NFU4 85 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 ZNF592Q92610 1267 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 EID2BQ96D98 161 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 LRFN5Q96NI6 719 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 NLNQ9BYT8 704 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 C10orf88Q9H8K7 445 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 LATS2Q9NRM7 1088 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 IMP3Q9NV31 184 aaKnown RBP13.96□□□□□ -0.17
RAB1A-201ENST00000398529 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.96□□□□□ -0.172e-7■■■■■ 27.2
RAB1A-201ENST00000398529 TCFL5Q9UL49 500 aa13.96□□□□□ -0.17
RAB1A-201ENST00000398529 PSMD13Q9UNM6 376 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms