RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 ARRDC3Q96B67 414 aa18.02■□□□□ 0.48
MBD1-208ENST00000398493 SIPA1Q96FS4 1042 aa18.02■□□□□ 0.48
MBD1-208ENST00000398493 LRIG1Q96JA1 1093 aa18.02■□□□□ 0.48
MBD1-208ENST00000398493 PANX3Q96QZ0 392 aa18.02■□□□□ 0.48
MBD1-208ENST00000398493 LRFN3Q9BTN0 628 aa18.02■□□□□ 0.48
MBD1-208ENST00000398493 RAD18Q9NS91 495 aa18.02■□□□□ 0.48
MBD1-208ENST00000398493 SERGEFQ9UGK8 458 aa18.02■□□□□ 0.48
MBD1-208ENST00000398493 L3MBTL1Q9Y468 752 aa18.02■□□□□ 0.48
MBD1-208ENST00000398493 COPG1Q9Y678 874 aaKnown RBP18.02■□□□□ 0.48
MBD1-208ENST00000398493 GPR39O43194 453 aa18.02■□□□□ 0.47
MBD1-208ENST00000398493 LAMTOR5O43504 91 aa18.02■□□□□ 0.47
MBD1-208ENST00000398493 VPS4BO75351 444 aa18.02■□□□□ 0.47
MBD1-208ENST00000398493 TRIM16O95361 564 aa18.02■□□□□ 0.47
MBD1-208ENST00000398493 RPS17P08708 135 aaKnown RBP18.02■□□□□ 0.47
MBD1-208ENST00000398493 C7P10643 843 aa18.02■□□□□ 0.47
MBD1-208ENST00000398493 KHDC1Q4VXA5 237 aaKnown RBP18.02■□□□□ 0.47
MBD1-208ENST00000398493 ZNF776Q68DI1 518 aaPredicted RBP18.02■□□□□ 0.47
MBD1-208ENST00000398493 CLEC6AQ6EIG7 209 aa18.02■□□□□ 0.47
MBD1-208ENST00000398493 KIAA1324Q6UXG2 1013 aaKnown RBP18.02■□□□□ 0.47
MBD1-208ENST00000398493 PELI3Q8N2H9 469 aa18.02■□□□□ 0.47
MBD1-208ENST00000398493 PGBD3Q8N328 593 aa18.02■□□□□ 0.47
MBD1-208ENST00000398493 AADATQ8N5Z0 425 aa18.02■□□□□ 0.47
MBD1-208ENST00000398493 FRMD1Q8N878 549 aa18.02■□□□□ 0.47
MBD1-208ENST00000398493 KYQ8NBH2 561 aa18.02■□□□□ 0.47
MBD1-208ENST00000398493 OR56A4Q8NGH8 313 aa18.02■□□□□ 0.47
MBD1-208ENST00000398493 HCAR2Q8TDS4 363 aa18.02■□□□□ 0.47
MBD1-208ENST00000398493 C19orf60Q96EN9 201 aa18.02■□□□□ 0.47
MBD1-208ENST00000398493 RSRC1Q96IZ7 334 aaKnown RBP18.02■□□□□ 0.47
MBD1-208ENST00000398493 COPS8Q99627 209 aa18.02■□□□□ 0.47
MBD1-208ENST00000398493 BOCQ9BWV1 1114 aa18.02■□□□□ 0.47
MBD1-208ENST00000398493 EFCAB1Q9HAE3 211 aa18.02■□□□□ 0.47
MBD1-208ENST00000398493 TNFRSF12AQ9NP84 129 aa18.02■□□□□ 0.47
MBD1-208ENST00000398493 SPATS2LQ9NUQ6 558 aaKnown RBP18.02■□□□□ 0.47
MBD1-208ENST00000398493 KLHL42Q9P2K6 505 aa18.02■□□□□ 0.47
MBD1-208ENST00000398493 MCM8Q9UJA3 840 aa18.02■□□□□ 0.47
MBD1-208ENST00000398493 IKZF3Q9UKT9 509 aa18.02■□□□□ 0.47
MBD1-208ENST00000398493 A0A088AWK7 358 aa18.01■□□□□ 0.47
MBD1-208ENST00000398493 NCF1BA6NI72 391 aaPredicted RBP18.01■□□□□ 0.47
MBD1-208ENST00000398493 NCF1CA8MVU1 366 aaPredicted RBP18.01■□□□□ 0.47
MBD1-208ENST00000398493 KPNA3O00505 521 aaPredicted RBP18.01■□□□□ 0.47
MBD1-208ENST00000398493 RAD51BO15315 384 aa18.01■□□□□ 0.47
MBD1-208ENST00000398493 APBB3O95704 486 aa18.01■□□□□ 0.47
MBD1-208ENST00000398493 CHEK2O96017 543 aa18.01■□□□□ 0.47
MBD1-208ENST00000398493 NCF1P14598 390 aaPredicted RBP18.01■□□□□ 0.47
MBD1-208ENST00000398493 GM2AP17900 193 aa18.01■□□□□ 0.47
MBD1-208ENST00000398493 XPAP23025 273 aaPredicted RBP18.01■□□□□ 0.47
MBD1-208ENST00000398493 DRD3P35462 400 aa18.01■□□□□ 0.47
MBD1-208ENST00000398493 TGFBIQ15582 683 aa18.01■□□□□ 0.47
MBD1-208ENST00000398493 C1orf146Q5VVC0 180 aa18.01■□□□□ 0.47
MBD1-208ENST00000398493 DEFB107AQ8IZN7 70 aa18.01■□□□□ 0.47
MBD1-208ENST00000398493 CAMKK1Q8N5S9 505 aa18.01■□□□□ 0.47
MBD1-208ENST00000398493 ZBTB2Q8N680 514 aa18.01■□□□□ 0.47
MBD1-208ENST00000398493 SERPINI1Q99574 410 aa18.01■□□□□ 0.47
MBD1-208ENST00000398493 FAM126AQ9BYI3 521 aaPredicted RBP18.01■□□□□ 0.47
MBD1-208ENST00000398493 LATS2Q9NRM7 1088 aa18.01■□□□□ 0.47
MBD1-208ENST00000398493 B4GALT6Q9UBX8 382 aa18.01■□□□□ 0.47
MBD1-208ENST00000398493 AIM2O14862 343 aa18■□□□□ 0.47
MBD1-208ENST00000398493 RNASEH1O60930 286 aaKnown RBP18■□□□□ 0.47
MBD1-208ENST00000398493 PRNPP04156 253 aa18■□□□□ 0.47
MBD1-208ENST00000398493 ITGAXP20702 1163 aa18■□□□□ 0.47
MBD1-208ENST00000398493 VIPR1P32241 457 aa18■□□□□ 0.47
MBD1-208ENST00000398493 SPINT3P49223 89 aa18■□□□□ 0.47
MBD1-208ENST00000398493 ATP4BP51164 291 aa18■□□□□ 0.47
MBD1-208ENST00000398493 STX1BP61266 288 aa18■□□□□ 0.47
MBD1-208ENST00000398493 IRX1P78414 480 aaPredicted RBP18■□□□□ 0.47
MBD1-208ENST00000398493 CSTF1Q05048 431 aaKnown RBP18■□□□□ 0.47
MBD1-208ENST00000398493 STX5Q13190 355 aa18■□□□□ 0.47
MBD1-208ENST00000398493 ART3Q13508 389 aa18■□□□□ 0.47
MBD1-208ENST00000398493 CCDC6Q16204 474 aa18■□□□□ 0.47
MBD1-208ENST00000398493 UGT3A2Q3SY77 523 aa18■□□□□ 0.47
MBD1-208ENST00000398493 KANK2Q63ZY3 851 aa18■□□□□ 0.47
MBD1-208ENST00000398493 ZNF483Q8TF39 744 aaPredicted RBP18■□□□□ 0.47
MBD1-208ENST00000398493 HGH1Q9BTY7 390 aa18■□□□□ 0.47
MBD1-208ENST00000398493 NUSAP1Q9BXS6 441 aaKnown RBP18■□□□□ 0.47
MBD1-208ENST00000398493 FBRSQ9HAH7 460 aa18■□□□□ 0.47
MBD1-208ENST00000398493 SEMA4BQ9NPR2 832 aaPredicted RBP18■□□□□ 0.47
MBD1-208ENST00000398493 SLC7A8Q9UHI5 535 aa18■□□□□ 0.47
MBD1-208ENST00000398493 A0A1W2PP55 124 aa18■□□□□ 0.47
MBD1-208ENST00000398493 LRRC14BA6NHZ5 514 aa18■□□□□ 0.47
MBD1-208ENST00000398493 CCNT2O60583 730 aaKnown RBP18■□□□□ 0.47
MBD1-208ENST00000398493 CBSLP0DN79 551 aa18■□□□□ 0.47
MBD1-208ENST00000398493 CBSP35520 551 aa18■□□□□ 0.47
MBD1-208ENST00000398493 TBL3Q12788 808 aaKnown RBP18■□□□□ 0.47
MBD1-208ENST00000398493 ACSBG2Q5FVE4 666 aa18■□□□□ 0.47
MBD1-208ENST00000398493 LARP4Q71RC2 724 aaKnown RBP eCLIP18■□□□□ 0.47
MBD1-208ENST00000398493 DSG4Q86SJ6 1040 aa18■□□□□ 0.47
MBD1-208ENST00000398493 TWIST2Q8WVJ9 160 aa18■□□□□ 0.47
MBD1-208ENST00000398493 WDR60Q8WVS4 1066 aa18■□□□□ 0.47
MBD1-208ENST00000398493 RLN3Q8WXF3 142 aa18■□□□□ 0.47
MBD1-208ENST00000398493 NSUN5Q96P11 429 aaKnown RBP18■□□□□ 0.47
MBD1-208ENST00000398493 KCTD5Q9NXV2 234 aa18■□□□□ 0.47
MBD1-208ENST00000398493 STOML1Q9UBI4 398 aa18■□□□□ 0.47
MBD1-208ENST00000398493 PCTPQ9UKL6 214 aa18■□□□□ 0.47
MBD1-208ENST00000398493 PRPF19Q9UMS4 504 aaKnown RBP18■□□□□ 0.47
MBD1-208ENST00000398493 DNAJC15Q9Y5T4 150 aa18■□□□□ 0.47
MBD1-208ENST00000398493 PRSS21Q9Y6M0 314 aa18■□□□□ 0.47
MBD1-208ENST00000398493 ZNF318Q5VUA4 2279 aa17.99■□□□□ 0.47
MBD1-208ENST00000398493 ZNF106Q9H2Y7 1883 aaKnown RBP17.99■□□□□ 0.47
MBD1-208ENST00000398493 PSMG1O95456 288 aa17.99■□□□□ 0.47
MBD1-208ENST00000398493 DNTTP04053 509 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms