RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 YPEL5P62699 121 aa19.09■□□□□ 0.65
PDLIM2-205ENST00000397761 PHKG1Q16816 387 aa19.09■□□□□ 0.65
PDLIM2-205ENST00000397761 DOK6Q6PKX4 331 aa19.09■□□□□ 0.65
PDLIM2-205ENST00000397761 FRMD1Q8N878 549 aa19.09■□□□□ 0.65
PDLIM2-205ENST00000397761 PTGR2Q8N8N7 351 aaPredicted RBP19.09■□□□□ 0.65
PDLIM2-205ENST00000397761 PDPRQ8NCN5 879 aa19.09■□□□□ 0.65
PDLIM2-205ENST00000397761 BIRC7Q96CA5 298 aa19.09■□□□□ 0.65
PDLIM2-205ENST00000397761 CNDP1Q96KN2 507 aa19.09■□□□□ 0.65
PDLIM2-205ENST00000397761 ORAI3Q9BRQ5 295 aa19.09■□□□□ 0.65
PDLIM2-205ENST00000397761 SLC12A9Q9BXP2 914 aa19.09■□□□□ 0.65
PDLIM2-205ENST00000397761 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.09■□□□□ 0.65
PDLIM2-205ENST00000397761 GON4LQ3T8J9 2241 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 PRR19A6NJB7 356 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 PRAMEF26H0Y7S4 382 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 GRID2O43424 1007 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 LYPLA1O75608 230 aaPredicted RBP19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 NAA20P61599 178 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 CDKL1Q00532 357 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 DMPKQ09013 629 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 GALNT1Q10472 559 aaPredicted RBP19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 RPA4Q13156 261 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 NFATC4Q14934 902 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 SETDB1Q15047 1291 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 PFKFB4Q16877 469 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 SYTL3Q4VX76 610 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 ZNF678Q5SXM1 525 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 CRTC3Q6UUV7 619 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 ABI3BPQ7Z7G0 1075 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 AMZ2Q86W34 360 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 LSMEM2Q8N112 164 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 FBXO39Q8N4B4 442 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 LILRA3Q8N6C8 439 aaPredicted RBP19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 RLN3Q8WXF3 142 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 EXT2Q93063 718 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 PHF21BQ96EK2 531 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 MYOCQ99972 504 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 DPEP2Q9H4A9 486 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 CYP4F12Q9HCS2 524 aa19.08■□□□□ 0.64
PDLIM2-205ENST00000397761 FFAR2O15552 330 aa19.07■□□□□ 0.64
PDLIM2-205ENST00000397761 PSIP1O75475 530 aaKnown RBP19.07■□□□□ 0.64
PDLIM2-205ENST00000397761 GFAPP14136 432 aa19.07■□□□□ 0.64
PDLIM2-205ENST00000397761 PREPP48147 710 aa19.07■□□□□ 0.64
PDLIM2-205ENST00000397761 CLDN2P57739 230 aa19.07■□□□□ 0.64
PDLIM2-205ENST00000397761 UNC50Q53HI1 259 aa19.07■□□□□ 0.64
PDLIM2-205ENST00000397761 GKAP1Q5VSY0 366 aaPredicted RBP19.07■□□□□ 0.64
PDLIM2-205ENST00000397761 FRMD7Q6ZUT3 714 aa19.07■□□□□ 0.64
PDLIM2-205ENST00000397761 FAM160A2Q8N612 972 aaPredicted RBP19.07■□□□□ 0.64
PDLIM2-205ENST00000397761 ELAC2Q9BQ52 826 aaKnown RBP19.07■□□□□ 0.64
PDLIM2-205ENST00000397761 TIMM29Q9BSF4 260 aa19.07■□□□□ 0.64
PDLIM2-205ENST00000397761 TRMOQ9BU70 441 aa19.07■□□□□ 0.64
PDLIM2-205ENST00000397761 GSTO2Q9H4Y5 243 aa19.07■□□□□ 0.64
PDLIM2-205ENST00000397761 PARVBQ9HBI1 364 aa19.07■□□□□ 0.64
PDLIM2-205ENST00000397761 SLC23A2Q9UGH3 650 aa19.07■□□□□ 0.64
PDLIM2-205ENST00000397761 TSR3Q9UJK0 312 aaKnown RBP19.07■□□□□ 0.64
PDLIM2-205ENST00000397761 THADAQ6YHU6 1953 aa19.07■□□□□ 0.64
PDLIM2-205ENST00000397761 PCM1Q15154 2024 aa19.07■□□□□ 0.64
PDLIM2-205ENST00000397761 SPAG17Q6Q759 2223 aa19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 TNFRSF10CO14798 259 aa19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 KCNJ13O60928 360 aa19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 FSBPO95073 299 aa19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 PDGFBP01127 241 aaPredicted RBP19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 RPS17P08708 135 aaKnown RBP19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 VCLP18206 1134 aa19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 KELP23276 732 aa19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 PDHA2P29803 388 aa19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 PBLDP30039 288 aaPredicted RBP19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 PYCR3Q53H96 274 aa19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 METRNLQ641Q3 311 aa19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 FAM83HQ6ZRV2 1179 aaPredicted RBP19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 FRA10AC1Q70Z53 315 aa19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 SPATA21Q7Z572 469 aa19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 RAB44Q7Z6P3 723 aaPredicted RBP19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 CRLF3Q8IUI8 442 aa19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 CFAP206Q8IYR0 622 aa19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 CCNYL1Q8N7R7 359 aa19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 CADM4Q8NFZ8 388 aa19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 UBTD2Q8WUN7 234 aa19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 GPR27Q9NS67 375 aa19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 CD274Q9NZQ7 290 aa19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 KLHL14Q9P2G3 628 aa19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 PTBP2Q9UKA9 531 aaKnown RBP19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 PDE10AQ9Y233 779 aa19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 CA5BQ9Y2D0 317 aa19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 ARHGEF17Q96PE2 2063 aaPredicted RBP19.06■□□□□ 0.64
PDLIM2-205ENST00000397761 TNRC6BQ9UPQ9 1833 aaKnown RBP19.05■□□□□ 0.64
PDLIM2-205ENST00000397761 A0A1W2PPC4 97 aa19.05■□□□□ 0.64
PDLIM2-205ENST00000397761 H0Y8X5 98 aa19.05■□□□□ 0.64
PDLIM2-205ENST00000397761 PI15O43692 258 aa19.05■□□□□ 0.64
PDLIM2-205ENST00000397761 AOC1P19801 751 aa19.05■□□□□ 0.64
PDLIM2-205ENST00000397761 PXNP49023 591 aaPredicted RBP19.05■□□□□ 0.64
PDLIM2-205ENST00000397761 AP1S2P56377 157 aa19.05■□□□□ 0.64
PDLIM2-205ENST00000397761 NFE2L1Q14494 772 aa19.05■□□□□ 0.64
PDLIM2-205ENST00000397761 PCBP2Q15366 365 aaKnown RBP eCLIP19.05■□□□□ 0.649e-7■■■■□ 24.1
PDLIM2-205ENST00000397761 ARL13AQ5H913 290 aaPredicted RBP19.05■□□□□ 0.64
PDLIM2-205ENST00000397761 METTL2BQ6P1Q9 378 aaKnown RBP19.05■□□□□ 0.64
PDLIM2-205ENST00000397761 UBE2R2Q712K3 238 aaPredicted RBP19.05■□□□□ 0.64
PDLIM2-205ENST00000397761 FBXO15Q8NCQ5 510 aaPredicted RBP19.05■□□□□ 0.64
PDLIM2-205ENST00000397761 FAM174AQ8TBP5 190 aa19.05■□□□□ 0.64
PDLIM2-205ENST00000397761 PPP4R1Q8TF05 950 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms