RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 BDH2Q9BUT1 245 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 C10orf88Q9H8K7 445 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 HHATLQ9HCP6 504 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 CCM2LQ9NUG4 571 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-206ENST00000397617 DNAJC11Q9NVH1 559 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 C1orf109Q9NX04 203 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 MGAT4DA6NG13 374 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 KLHL41O60662 606 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 NOL3O60936 208 aaKnown RBP5.76□□□□□ -1.49
PTPRD-206ENST00000397617 IL10P22301 178 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 CSKP41240 450 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 NRIP1P48552 1158 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 KCNK10P57789 538 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 RIPPLY1Q0D2K3 151 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 HP1BP3Q5SSJ5 553 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-206ENST00000397617 TMTC4Q5T4D3 741 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 TXNDC8Q6A555 127 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 LPCAT1Q8NF37 534 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 HASPINQ8TF76 798 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 RHBDF1Q96CC6 855 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 MYCBPQ99417 103 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-206ENST00000397617 GPR21Q99679 349 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 OLFM1Q99784 485 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 LBHD1Q9BQE6 289 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-206ENST00000397617 C9orf16Q9BUW7 83 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 ROGDIQ9GZN7 287 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 TMEM181Q9P2C4 612 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 ZNF639Q9UID6 485 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 BLOC1S6Q9UL45 172 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 FZD4Q9ULV1 537 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 SLC27A5Q9Y2P5 690 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 SPO11Q9Y5K1 396 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 FAM221BA6H8Z2 402 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 GUCY1B2O75343 617 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 MYO1DO94832 1006 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 ERGP11308 486 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 CDH2P19022 906 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-206ENST00000397617 LMAN2Q12907 356 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 MED21Q13503 144 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 FLOT2Q14254 428 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 FASTKQ14296 549 aaKnown RBP5.76□□□□□ -1.49
PTPRD-206ENST00000397617 ATP6AP1LQ52LC2 224 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 ERN2Q76MJ5 926 aaKnown RBP5.76□□□□□ -1.49
PTPRD-206ENST00000397617 GPR149Q86SP6 731 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 TTC7BQ86TV6 843 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 TNS4Q8IZW8 715 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 TRPV3Q8NET8 790 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 TIMM29Q9BSF4 260 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 S100A14Q9HCY8 104 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 ENAMQ9NRM1 1142 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 A0A088AWK7 358 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 MRASO14807 208 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 CLDN9O95484 217 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 RHOP08100 348 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 PDHA1P08559 390 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 ARRB2P32121 409 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 MXRA7P84157 204 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 SETMARQ53H47 684 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-206ENST00000397617 EGFL6Q8IUX8 553 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 ZBTB2Q8N680 514 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 PPM1HQ9ULR3 514 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 WASF2Q9Y6W5 498 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 A0A0D9SEW6 157 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 MAGEA13PA6NCF6 341 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 BANF1O75531 89 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 ANP32DO95626 131 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 PTDSS1P48651 473 aaKnown RBP5.76□□□□□ -1.49
PTPRD-206ENST00000397617 MTM1Q13496 603 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 TP53INP2Q8IXH6 220 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 LPIN3Q9BQK8 851 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 RMND5AQ9H871 391 aa5.76□□□□□ -1.49
PTPRD-206ENST00000397617 TUBA8Q9NY65 449 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-206ENST00000397617 C10orf142B7Z368 130 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 H0YAE9 185 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 E2F3O00716 465 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 SGTAO43765 313 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 ANXA11P50995 505 aaKnown RBP5.75□□□□□ -1.49
PTPRD-206ENST00000397617 VAC14Q08AM6 782 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 PPM1JQ5JR12 505 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 HABP4Q5JVS0 413 aaKnown RBP5.75□□□□□ -1.49
PTPRD-206ENST00000397617 TTC23Q5W5X9 447 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 KIAA1161Q6NSJ0 714 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 ADIPOR2Q86V24 386 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 LONP2Q86WA8 852 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 RBM12BQ8IXT5 1001 aaKnown RBP5.75□□□□□ -1.49
PTPRD-206ENST00000397617 CPA6Q8N4T0 437 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 LINC00471Q8N535 108 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 ARL14EPQ8N8R7 260 aaPredicted RBP5.75□□□□□ -1.49
PTPRD-206ENST00000397617 OR2A12Q8NGT7 310 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 RASSF5Q8WWW0 418 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 SPDL1Q96EA4 605 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 SCLYQ96I15 445 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 SCOCQ9UIL1 159 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 DMTF1Q9Y222 760 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 MUC6Q6W4X9 2439 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 ARPC4-TTLL3A0A0A6YYG9 625 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 ADH1BP00325 375 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 SYN1P17600 705 aa5.75□□□□□ -1.49
PTPRD-206ENST00000397617 PSMA4P25789 261 aaKnown RBP5.75□□□□□ -1.49
PTPRD-206ENST00000397617 CCL23P55773 120 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms