RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 SLCO1B1Q9Y6L6 691 aa23.08■■□□□ 1.29
TSPAN4-202ENST00000397396 ABCA7Q8IZY2 2146 aa23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 ZBTB14O43829 449 aa23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 TOP3BO95985 862 aaKnown RBP23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 SLC35G4P0C7Q5 338 aa23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 GLRBP48167 497 aa23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 NAPRTQ6XQN6 538 aa23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 FRA10AC1Q70Z53 315 aa23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 RD3Q7Z3Z2 195 aa23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 ISCA2Q86U28 154 aa23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 SPATA6LQ8N4H0 392 aa23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 CEP76Q8TAP6 659 aa23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 DENND1AQ8TEH3 1009 aa23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 CCDC126Q96EE4 140 aa23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 LOXL4Q96JB6 756 aa23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 TRIM54Q9BYV2 358 aa23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 OSGEPL1Q9H4B0 414 aa23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 ALG9Q9H6U8 611 aa23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 ZNF358Q9NW07 568 aa23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 SLC17A7Q9P2U7 560 aa23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 SLC23A2Q9UGH3 650 aa23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 RNF112Q9ULX5 631 aa23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 DNAJC16Q9Y2G8 782 aa23.08■■□□□ 1.28
TSPAN4-202ENST00000397396 CATP04040 527 aaKnown RBP23.07■■□□□ 1.28
TSPAN4-202ENST00000397396 CSF2P04141 144 aa23.07■■□□□ 1.28
TSPAN4-202ENST00000397396 RPN2P04844 631 aa23.07■■□□□ 1.28
TSPAN4-202ENST00000397396 CTSEP14091 401 aa23.07■■□□□ 1.28
TSPAN4-202ENST00000397396 NME1P15531 152 aaKnown RBP23.07■■□□□ 1.28
TSPAN4-202ENST00000397396 CYP2A7P20853 494 aa23.07■■□□□ 1.28
TSPAN4-202ENST00000397396 ETV4P43268 484 aa23.07■■□□□ 1.28
TSPAN4-202ENST00000397396 PREPP48147 710 aa23.07■■□□□ 1.28
TSPAN4-202ENST00000397396 UNC5DQ6UXZ4 953 aa23.07■■□□□ 1.28
TSPAN4-202ENST00000397396 CYHR1Q6ZMK1 362 aa23.07■■□□□ 1.28
TSPAN4-202ENST00000397396 PDZD3Q86UT5 571 aa23.07■■□□□ 1.28
TSPAN4-202ENST00000397396 ARMC2Q8NEN0 867 aa23.07■■□□□ 1.28
TSPAN4-202ENST00000397396 ERVMER34-1Q9H9K5 563 aa23.07■■□□□ 1.28
TSPAN4-202ENST00000397396 TM7SF3Q9NS93 570 aa23.07■■□□□ 1.28
TSPAN4-202ENST00000397396 DNAJC28Q9NX36 388 aa23.07■■□□□ 1.28
TSPAN4-202ENST00000397396 APOBEC3BQ9UH17 382 aaKnown RBP23.07■■□□□ 1.28
TSPAN4-202ENST00000397396 EMCNQ9ULC0 261 aa23.07■■□□□ 1.28
TSPAN4-202ENST00000397396 NPEPPSL1A6NEC2 478 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 PRR19A6NJB7 356 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 SMIM24O75264 130 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 MYL2P10916 166 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 CHN1P15882 459 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 JUNDP17535 347 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 GMPRP36959 345 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 HNRNPKP61978 463 aaKnown RBP eCLIP23.06■■□□□ 1.288e-6■■■■□ 19.7
TSPAN4-202ENST00000397396 IL9RQ01113 521 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 CTBSQ01459 385 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 ASPHQ12797 758 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 MPP2Q14168 576 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 TSNQ15631 228 aaKnown RBP23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 C16orf46Q6P387 395 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 WASH2PQ6VEQ5 465 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 PRR23BQ6ZRT6 265 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 SDR16C5Q8N3Y7 309 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 MAGEC3Q8TD91 643 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 MGARPQ8TDB4 240 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 DYDC1Q8WWB3 177 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 OR52A5Q9H2C5 316 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 RDH14Q9HBH5 336 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 WASH6PQ9NQA3 447 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 RAB23Q9ULC3 237 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 KCNK6Q9Y257 313 aa23.06■■□□□ 1.28
TSPAN4-202ENST00000397396 ATXN2Q99700 1313 aaKnown RBP23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 BIRC5O15392 142 aa23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 MATN4O95460 622 aa23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 DHRS4L1P0CG22 281 aa23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 TPBGLP0DKB5 382 aa23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 SLC2A4P14672 509 aa23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 MAP4P27816 1152 aaKnown RBP23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 HALP42357 657 aa23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 CSNK1EP49674 416 aaKnown RBP23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 ATP1A2P50993 1020 aa23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 ELOCQ15369 112 aa23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 FAM83HQ6ZRV2 1179 aaPredicted RBP23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 SPATS2Q86XZ4 545 aaKnown RBP23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 GPSM1Q86YR5 675 aa23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 VRK3Q8IV63 474 aa23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 SLC22A9Q8IVM8 553 aa23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 TRIM42Q8IWZ5 723 aa23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 LILRA3Q8N6C8 439 aaPredicted RBP23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 GPBAR1Q8TDU6 330 aa23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 ASB11Q8WXH4 323 aa23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 PIGKQ92643 395 aa23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 PTERQ96BW5 349 aa23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 SLC12A9Q9BXP2 914 aa23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 UNKQ9C0B0 810 aaKnown RBP23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 NUDT4Q9NZJ9 180 aa23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 COPG2Q9UBF2 871 aa23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 OARD1Q9Y530 152 aa23.05■■□□□ 1.28
TSPAN4-202ENST00000397396 LRP4O75096 1905 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 TNRC6BQ9UPQ9 1833 aaKnown RBP23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 PDZK1P1A8MUH7 402 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 TK2O00142 265 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 CDC7O00311 574 aa23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 PSIP1O75475 530 aaKnown RBP23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 S100BP04271 92 aaPredicted RBP23.04■■□□□ 1.28
TSPAN4-202ENST00000397396 HIST1H2AGP0C0S8 130 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms