RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 FAM96AQ9H5X1 160 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 COG4Q9H9E3 785 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 MRM3Q9HC36 420 aaKnown RBP13.61□□□□□ -0.23
SEC13-204ENST00000397099 SIDT1Q9NXL6 827 aaKnown RBP13.61□□□□□ -0.23
SEC13-204ENST00000397099 KLHL3Q9UH77 587 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 SLC24A2Q9UI40 661 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 TMEM184BQ9Y519 407 aaPredicted RBP13.61□□□□□ -0.23
SEC13-204ENST00000397099 PIEZO2Q9H5I5 2752 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 FASNP49327 2511 aaKnown RBP13.6□□□□□ -0.23
SEC13-204ENST00000397099 GOLGA6L10A0A0M3HER8 536 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 CCDC162PA2VCL2 907 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 OR5K3A6NET4 321 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 TLCD2A6NGC4 264 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 PGRMC1O00264 195 aaKnown RBP13.6□□□□□ -0.23
SEC13-204ENST00000397099 MAP3K7O43318 606 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 MT-ND3P03897 115 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 ETS1P14921 441 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 NELFEP18615 380 aaKnown RBP13.6□□□□□ -0.23
SEC13-204ENST00000397099 CXCR5P32302 372 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 FOXN2P32314 431 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 GFERP55789 205 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 ACY1Q03154 408 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 SRSF6Q13247 344 aaKnown RBP13.6□□□□□ -0.23
SEC13-204ENST00000397099 CCDC38Q502W7 563 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 ANKS6Q68DC2 871 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 VASH2Q86V25 355 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 PIANPQ8IYJ0 282 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 NLGN4XQ8N0W4 816 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 BOD1L1Q8NFC6 3051 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 NLGN4YQ8NFZ3 816 aaPredicted RBP13.6□□□□□ -0.23
SEC13-204ENST00000397099 GPR150Q8NGU9 434 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 OR6P1Q8NGX9 317 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 GRK7Q8WTQ7 553 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 TTC9Q92623 222 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 RSC1A1Q92681 617 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 NKD1Q969G9 470 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 OR52A5Q9H2C5 316 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 PDE7BQ9NP56 450 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 PIH1D1Q9NWS0 290 aaKnown RBP13.6□□□□□ -0.23
SEC13-204ENST00000397099 HRASLS2Q9NWW9 162 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 POLG2Q9UHN1 485 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 PILRAQ9UKJ1 303 aa13.6□□□□□ -0.23
SEC13-204ENST00000397099 UBA6A0AVT1 1052 aaPredicted RBP13.59□□□□□ -0.23
SEC13-204ENST00000397099 MAGEB16A2A368 324 aa13.59□□□□□ -0.23
SEC13-204ENST00000397099 CCL22O00626 93 aa13.59□□□□□ -0.23
SEC13-204ENST00000397099 EFSO43281 561 aa13.59□□□□□ -0.23
SEC13-204ENST00000397099 GOT2P00505 430 aaKnown RBP13.59□□□□□ -0.23
SEC13-204ENST00000397099 POLBP06746 335 aa13.59□□□□□ -0.23
SEC13-204ENST00000397099 MAGEA6P43360 314 aa13.59□□□□□ -0.23
SEC13-204ENST00000397099 ARL4DP49703 201 aa13.59□□□□□ -0.23
SEC13-204ENST00000397099 CDKN1CP49918 316 aaPredicted RBP13.59□□□□□ -0.23
SEC13-204ENST00000397099 ABHD18Q0P651 414 aa13.59□□□□□ -0.23
SEC13-204ENST00000397099 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.59□□□□□ -0.23
SEC13-204ENST00000397099 ZNF658BQ4V348 819 aaPredicted RBP13.59□□□□□ -0.23
SEC13-204ENST00000397099 DNTTIP2Q5QJE6 756 aaKnown RBP13.59□□□□□ -0.23
SEC13-204ENST00000397099 TMTC4Q5T4D3 741 aa13.59□□□□□ -0.23
SEC13-204ENST00000397099 LRRC8BQ6P9F7 803 aa13.59□□□□□ -0.23
SEC13-204ENST00000397099 LRRC6Q86X45 466 aa13.59□□□□□ -0.23
SEC13-204ENST00000397099 CACNA2D3Q8IZS8 1091 aa13.59□□□□□ -0.23
SEC13-204ENST00000397099 ESX1Q8N693 406 aa13.59□□□□□ -0.23
SEC13-204ENST00000397099 CLDN19Q8N6F1 224 aa13.59□□□□□ -0.23
SEC13-204ENST00000397099 PRELID2Q8N945 189 aa13.59□□□□□ -0.23
SEC13-204ENST00000397099 OR8K5Q8NH50 307 aa13.59□□□□□ -0.23
SEC13-204ENST00000397099 JPH3Q8WXH2 748 aaPredicted RBP13.59□□□□□ -0.23
SEC13-204ENST00000397099 MAGOHBQ96A72 148 aaKnown RBP13.59□□□□□ -0.23
SEC13-204ENST00000397099 RMDN2Q96LZ7 410 aa13.59□□□□□ -0.23
SEC13-204ENST00000397099 TFB2MQ9H5Q4 396 aaKnown RBP13.59□□□□□ -0.23
SEC13-204ENST00000397099 SYTL2Q9HCH5 934 aa13.59□□□□□ -0.23
SEC13-204ENST00000397099 MRFAP1Q9Y605 127 aa13.59□□□□□ -0.23
SEC13-204ENST00000397099 KPNA5O15131 536 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 RAD1O60671 282 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 STK17BO94768 372 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 ZBTB11O95625 1053 aaPredicted RBP13.58□□□□□ -0.24
SEC13-204ENST00000397099 RPN2P04844 631 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 ZSCAN5DPP0CG00 497 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 SFTPCP11686 197 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 FGF5P12034 268 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 MLNP12872 115 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 PAMP19021 973 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 GRIA1P42261 906 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 KCNJ1P48048 391 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 LEPRP48357 1165 aaKnown RBP13.58□□□□□ -0.24
SEC13-204ENST00000397099 ARSDP51689 593 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 HSD11B2P80365 405 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 MC1RQ01726 317 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 FOXM1Q08050 763 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 CYP1B1Q16678 543 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 SYTL3Q4VX76 610 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 RNF187Q5TA31 235 aaPredicted RBP13.58□□□□□ -0.24
SEC13-204ENST00000397099 MRNIPQ6NTE8 343 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 FAM92BQ6ZTR7 304 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 SDCCAG8Q86SQ7 713 aaPredicted RBP13.58□□□□□ -0.24
SEC13-204ENST00000397099 PPP1R3BQ86XI6 285 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 TBC1D21Q8IYX1 336 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 GLIS1Q8NBF1 620 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 SIDT2Q8NBJ9 832 aaKnown RBP13.58□□□□□ -0.24
SEC13-204ENST00000397099 ACTRT1Q8TDG2 376 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 ASZ1Q8WWH4 475 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 LCN9Q8WX39 176 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 TFGQ92734 400 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms