RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 INMTO95050 263 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 ZBTB11O95625 1053 aaPredicted RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 TSHRP16473 764 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 DRD4P21917 467 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 MPIP34949 423 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 NSG1P42857 185 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 CDKN1CP49918 316 aaPredicted RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 CORO7P57737 925 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 PTPN20Q4JDL3 420 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 EIPR1Q53HC9 387 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 DNM1P34Q6PK57 102 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 FAM131AQ6UXB0 335 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 LBX2Q6XYB7 198 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 TMPPEQ6ZT21 453 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 GKN2Q86XP6 184 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 FAM71AQ8IYT1 594 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 CPSF7Q8N684 471 aaKnown RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 Q8N9G6 341 aaPredicted RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 CAMKVQ8NCB2 501 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 OR10Q1Q8NGQ4 319 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 OR52J3Q8NH60 311 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 CAVIN3Q969G5 261 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 BORCS8Q96FH0 119 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 MIPEPQ99797 713 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 TLR10Q9BXR5 811 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 NOL11Q9H8H0 719 aaKnown RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 SPATA6Q9NWH7 488 aaPredicted RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 SUSD2Q9UGT4 822 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 TIMM22Q9Y584 194 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 SPIN1Q9Y657 262 aaPredicted RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 AP4B1Q9Y6B7 739 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 A0A1W2PQ45 241 aaPredicted RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 A0A1W2PQY0 241 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 SLC30A4O14863 429 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 BPNT1O95861 308 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 CSNK2A2P19784 350 aaPredicted RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 AP3S2P59780 193 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 BTN3A2P78410 334 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 BNIP1Q12981 228 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 AUHQ13825 339 aaKnown RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 NTRK3Q16288 839 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 TPGS2Q68CL5 300 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 ZNF776Q68DI1 518 aaPredicted RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 ZNF676Q8N7Q3 588 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 OR10H4Q8NGA5 316 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 IRGQQ8WZA9 623 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 PGM2Q96G03 612 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 KLHDC7BQ96G42 594 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 TCF12Q99081 682 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 USB1Q9BQ65 265 aaKnown RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 TMEM121BQ9BXQ6 578 aaPredicted RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 ENY2Q9NPA8 101 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 ZNF639Q9UID6 485 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 NR2E1Q9Y466 385 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 KCNU1A8MYU2 1149 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 L7N2F9 121 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 GPR25O00155 361 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 BTN3A3O00478 584 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 NRP2O60462 931 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 FARS2O95363 451 aaKnown RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 HSD11B1P28845 292 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 HTR7P34969 479 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 VAMP2P63027 116 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 ST3GAL4Q11206 333 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 NFATC2Q13469 925 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 SIM2Q14190 667 aaPredicted RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 TIGD5Q53EQ6 642 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 LRRC73Q5JTD7 316 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 LCLAT1Q6UWP7 414 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 SPATA19Q7Z5L4 167 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 TMEM126BQ8IUX1 230 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 SLC22A8Q8TCC7 542 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 BPIFB1Q8TDL5 484 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 C2orf15Q8WU43 125 aaKnown RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 ZNF184Q99676 751 aaPredicted RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 NPLQ9BXD5 320 aaPredicted RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 NIFKQ9BYG3 293 aaKnown RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 PDP1Q9P0J1 537 aaPredicted RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 L1RE1Q9UN81 338 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 ABCC3O15438 1527 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 hCG_1818297A0A087WSY0 165 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 A0A0J9YYE9 177 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 PRORSD1PA6NEY8 169 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 ARL5CA6NH57 179 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 SLC38A8A6NNN8 435 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 C9P02748 559 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 DCKP27707 260 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 HSD17B2P37059 387 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 NRIP1P48552 1158 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 KCNJ2P63252 427 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 IL18Q14116 193 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 CYP27C1Q4G0S4 372 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 MBLAC2Q68D91 279 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 DNAJB7Q7Z6W7 309 aaPredicted RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 ZER1Q7Z7L7 766 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 NUS1Q96E22 293 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 INPP4AQ96PE3 977 aaPredicted RBP7.09□□□□□ -1.27
UPF2-203ENST00000397053 NUDT4Q9NZJ9 180 aa7.09□□□□□ -1.27
UPF2-203ENST00000397053 ARHGEF5Q12774 1597 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms