RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 HAT1O14929 419 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 RENP00797 406 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 PGAM2P15259 253 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 MPSTP25325 297 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 POLR2JP52435 117 aaKnown RBP17.2■□□□□ 0.34
MCF2L-208ENST00000397030 ABATP80404 500 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 ECH1Q13011 328 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 WFIKKN2Q8TEU8 576 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 C3orf18Q9UK00 162 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 SAMD4AQ9UPU9 718 aaKnown RBP17.2■□□□□ 0.34
MCF2L-208ENST00000397030 TCF4P15884 667 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 NELFEP18615 380 aaKnown RBP17.2■□□□□ 0.34
MCF2L-208ENST00000397030 MSX2P35548 267 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-208ENST00000397030 BCAP31P51572 246 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 ECM1Q16610 540 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 SWI5Q1ZZU3 235 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 DCST1Q5T197 706 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 FAM131AQ6UXB0 335 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 RIT1Q92963 219 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 ACDQ96AP0 544 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 NXNL1Q96CM4 212 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 CPXM1Q96SM3 734 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 UNC93B1Q9H1C4 597 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 MBD2Q9UBB5 411 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 A0A0G2JLL6 359 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-208ENST00000397030 WNT9AO14904 365 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 GATBO75879 557 aaKnown RBP17.2■□□□□ 0.34
MCF2L-208ENST00000397030 ALPIP09923 528 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 KIR3DL1P43629 444 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 TXNL4AP83876 142 aaKnown RBP17.2■□□□□ 0.34
MCF2L-208ENST00000397030 TEX44Q53QW1 395 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 TXNDC8Q6A555 127 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 PRRT2Q7Z6L0 340 aaPredicted RBP17.2■□□□□ 0.34
MCF2L-208ENST00000397030 OR4C6Q8NH72 309 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 SLC22A17Q8WUG5 538 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 POF1BQ8WVV4 589 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 GSDMCQ9BYG8 508 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 GPR88Q9GZN0 384 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 LRRIQ1Q96JM4 1722 aa17.2■□□□□ 0.34
MCF2L-208ENST00000397030 NRP2O60462 931 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 MTHFRP42898 656 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 TSPAN5P62079 268 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 GPR68Q15743 365 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 PTCD3Q96EY7 689 aaKnown RBP17.19■□□□□ 0.34
MCF2L-208ENST00000397030 NKX2-4Q9H2Z4 354 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.19■□□□□ 0.34
MCF2L-208ENST00000397030 DIP2CQ9Y2E4 1556 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 ACVR2AP27037 513 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 PDSS1Q5T2R2 415 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 TRIM2Q9C040 744 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 ELAC1Q9H777 363 aaKnown RBP17.19■□□□□ 0.34
MCF2L-208ENST00000397030 PARPBPQ9NWS1 579 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 CYP3A7-CYP3A51PA0A087WV96 503 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 SOWAHBA6NEL2 793 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 LRIG2O94898 1065 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 CYP3A7P24462 503 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 RPS6KA3P51812 740 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 RASGEF1BQ0VAM2 473 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 TWIST2Q8WVJ9 160 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 FAM129BQ96TA1 746 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.19■□□□□ 0.34
MCF2L-208ENST00000397030 FGF18O76093 207 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 BPNT1O95861 308 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 CYP3A5P20815 502 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 CAPGP40121 348 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 ASMTP46597 345 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 ZNF460Q14592 562 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 RFTN2Q52LD8 501 aaPredicted RBP17.19■□□□□ 0.34
MCF2L-208ENST00000397030 PITRM1Q5JRX3 1037 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 ECHDC2Q86YB7 292 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 MSL3Q8N5Y2 521 aaKnown RBP17.19■□□□□ 0.34
MCF2L-208ENST00000397030 OR10H4Q8NGA5 316 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 TBC1D10AQ9BXI6 508 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 PCBD2Q9H0N5 130 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 GBA3Q9H227 469 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 AP2A2O94973 939 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 ASLP04424 464 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 COL6A1P12109 1028 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 ZNF16P17020 682 aaPredicted RBP17.19■□□□□ 0.34
MCF2L-208ENST00000397030 BROXQ5VW32 411 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 ZNF776Q68DI1 518 aaPredicted RBP17.19■□□□□ 0.34
MCF2L-208ENST00000397030 CLIP4Q8N3C7 705 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 BOLLQ8N9W6 283 aaKnown RBP17.19■□□□□ 0.34
MCF2L-208ENST00000397030 ZNF527Q8NB42 609 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 C11orf65Q8NCR3 313 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 PLCL2Q9UPR0 1127 aa17.19■□□□□ 0.34
MCF2L-208ENST00000397030 CCDC162PA2VCL2 907 aa17.18■□□□□ 0.34
MCF2L-208ENST00000397030 TRIM38O00635 465 aa17.18■□□□□ 0.34
MCF2L-208ENST00000397030 CST3P01034 146 aaPredicted RBP17.18■□□□□ 0.34
MCF2L-208ENST00000397030 NR2F6P10588 404 aa17.18■□□□□ 0.34
MCF2L-208ENST00000397030 RBMS1P29558 406 aaKnown RBP17.18■□□□□ 0.34
MCF2L-208ENST00000397030 CLCNKAP51800 687 aa17.18■□□□□ 0.34
MCF2L-208ENST00000397030 GMFBP60983 142 aa17.18■□□□□ 0.34
MCF2L-208ENST00000397030 VBP1P61758 197 aa17.18■□□□□ 0.34
MCF2L-208ENST00000397030 AP3S1Q92572 193 aa17.18■□□□□ 0.34
MCF2L-208ENST00000397030 C8orf48Q96LL4 319 aa17.18■□□□□ 0.34
MCF2L-208ENST00000397030 TNFRSF11BO00300 401 aa17.18■□□□□ 0.34
MCF2L-208ENST00000397030 CDC7O00311 574 aa17.18■□□□□ 0.34
MCF2L-208ENST00000397030 CHP2O43745 196 aa17.18■□□□□ 0.34
MCF2L-208ENST00000397030 FABP3P05413 133 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms