RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 SCHIP1Q9P0W5 487 aaPredicted RBP16.07■□□□□ 0.16
AP1S3-202ENST00000396653 FETUBQ9UGM5 382 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 PADI4Q9UM07 663 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 WDR37Q9Y2I8 494 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 DHRS7Q9Y394 339 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 HEBP2Q9Y5Z4 205 aa16.07■□□□□ 0.16
AP1S3-202ENST00000396653 NUDT21O43809 227 aaKnown RBP16.06■□□□□ 0.16
AP1S3-202ENST00000396653 PIAS1O75925 651 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 CBSLP0DN79 551 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 CEACAM1P13688 526 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 ENO3P13929 434 aaPredicted RBP16.06■□□□□ 0.16
AP1S3-202ENST00000396653 PNLIPP16233 465 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 GLB1P16278 677 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 FDXRP22570 491 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 PDHA2P29803 388 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 CBSP35520 551 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 ABCG1P45844 678 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 PREPP48147 710 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 MAZP56270 477 aaKnown RBP16.06■□□□□ 0.16
AP1S3-202ENST00000396653 HSPA14Q0VDF9 509 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 SLC29A2Q14542 456 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 NR1D2Q14995 579 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 CLCA4Q14CN2 919 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.06■□□□□ 0.16
AP1S3-202ENST00000396653 LRRC8EQ6NSJ5 796 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 NEK10Q6ZWH5 1172 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 ZNF438Q7Z4V0 828 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 RBM12BQ8IXT5 1001 aaKnown RBP16.06■□□□□ 0.16
AP1S3-202ENST00000396653 DEFB124Q8NES8 71 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 CD200R1Q8TD46 325 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 SLC44A1Q8WWI5 657 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 PATE1Q8WXA2 126 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 INPP5DQ92835 1189 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 GPR21Q99679 349 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 UCK1Q9HA47 277 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 POPDC3Q9HBV1 291 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 DLL3Q9NYJ7 618 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 ZNF624Q9P2J8 865 aaPredicted RBP16.06■□□□□ 0.16
AP1S3-202ENST00000396653 CPNE7Q9UBL6 633 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 TRMT6Q9UJA5 497 aaKnown RBP16.06■□□□□ 0.16
AP1S3-202ENST00000396653 ZNF180Q9UJW8 692 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 PSMD13Q9UNM6 376 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 VWA7Q9Y334 891 aa16.06■□□□□ 0.16
AP1S3-202ENST00000396653 EXOC1LA0A1B0GW35 172 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 GP1BAP07359 652 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 INHBAP08476 426 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 MTHFD1P11586 935 aaKnown RBP16.05■□□□□ 0.16
AP1S3-202ENST00000396653 ACADLP28330 430 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 NDUFS1P28331 727 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 SLC19A1P41440 591 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 ACADVLP49748 655 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 TIAL1Q01085 375 aaKnown RBP eCLIP16.05■□□□□ 0.16
AP1S3-202ENST00000396653 POU4F1Q01851 419 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 HHEXQ03014 270 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 ILKQ13418 452 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 NAA30Q147X3 362 aaPredicted RBP16.05■□□□□ 0.16
AP1S3-202ENST00000396653 TRIP6Q15654 476 aaKnown RBP16.05■□□□□ 0.16
AP1S3-202ENST00000396653 RPE65Q16518 533 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 SFTPA2Q8IWL1 248 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 TRIM48Q8IWZ4 208 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 MREGQ8N565 214 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 SIDT2Q8NBJ9 832 aaKnown RBP16.05■□□□□ 0.16
AP1S3-202ENST00000396653 GIMAP7Q8NHV1 300 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 UBLCP1Q8WVY7 318 aaPredicted RBP16.05■□□□□ 0.16
AP1S3-202ENST00000396653 ZFPM2Q8WW38 1151 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 SH3KBP1Q96B97 665 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 CXorf40BQ96DE9 158 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 TSPAN17Q96FV3 270 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 ATXN7L3BQ96GX2 97 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 ELMO2Q96JJ3 720 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 C12orf66Q96MD2 445 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 INSM2Q96T92 566 aaPredicted RBP16.05■□□□□ 0.16
AP1S3-202ENST00000396653 PAFAH2Q99487 392 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 PPCSQ9HAB8 311 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 PCDHGA1Q9Y5H4 931 aa16.05■□□□□ 0.16
AP1S3-202ENST00000396653 RP1P56715 2156 aa16.04■□□□□ 0.16
AP1S3-202ENST00000396653 OR52A4PA6NMU1 304 aa16.04■□□□□ 0.16
AP1S3-202ENST00000396653 CTIFO43310 598 aaKnown RBP16.04■□□□□ 0.16
AP1S3-202ENST00000396653 VIPP01282 170 aa16.04■□□□□ 0.16
AP1S3-202ENST00000396653 ITGA2BP08514 1039 aa16.04■□□□□ 0.16
AP1S3-202ENST00000396653 MAPK9P45984 424 aa16.04■□□□□ 0.16
AP1S3-202ENST00000396653 SERPINB9P50453 376 aa16.04■□□□□ 0.16
AP1S3-202ENST00000396653 CDKN2DP55273 166 aa16.04■□□□□ 0.16
AP1S3-202ENST00000396653 PDAP1Q13442 181 aaKnown RBP16.04■□□□□ 0.16
AP1S3-202ENST00000396653 BRD3Q15059 726 aa16.04■□□□□ 0.16
AP1S3-202ENST00000396653 UAP1Q16222 522 aaPredicted RBP16.04■□□□□ 0.16
AP1S3-202ENST00000396653 GUSBP11Q6P575 273 aa16.04■□□□□ 0.16
AP1S3-202ENST00000396653 UNC5DQ6UXZ4 953 aa16.04■□□□□ 0.16
AP1S3-202ENST00000396653 NAPRTQ6XQN6 538 aa16.04■□□□□ 0.16
AP1S3-202ENST00000396653 TAOK1Q7L7X3 1001 aa16.04■□□□□ 0.16
AP1S3-202ENST00000396653 VRK3Q8IV63 474 aa16.04■□□□□ 0.16
AP1S3-202ENST00000396653 SPDYE1Q8NFV5 336 aaPredicted RBP16.04■□□□□ 0.16
AP1S3-202ENST00000396653 SLC30A3Q99726 388 aa16.04■□□□□ 0.16
AP1S3-202ENST00000396653 OLFM1Q99784 485 aa16.04■□□□□ 0.16
AP1S3-202ENST00000396653 DHRS4Q9BTZ2 278 aa16.04■□□□□ 0.16
AP1S3-202ENST00000396653 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.04■□□□□ 0.16
AP1S3-202ENST00000396653 MVB12BQ9H7P6 319 aa16.04■□□□□ 0.16
AP1S3-202ENST00000396653 IMP3Q9NV31 184 aaKnown RBP16.04■□□□□ 0.16
AP1S3-202ENST00000396653 GALPQ9UBC7 116 aa16.04■□□□□ 0.16
AP1S3-202ENST00000396653 IKBKGQ9Y6K9 419 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms