RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 SRPK1Q96SB4 655 aaKnown RBP8.18□□□□□ -1.1
SCFD1-202ENST00000396629 PITPNM3Q9BZ71 974 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 TRIM8Q9BZR9 551 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 SLC7A5P2Q9GIP4 190 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 WWP1Q9H0M0 922 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 CHST11Q9NPF2 352 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 MYO1AQ9UBC5 1043 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 LIMA1Q9UHB6 759 aaKnown RBP8.18□□□□□ -1.1
SCFD1-202ENST00000396629 MYO6Q9UM54 1294 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 PKDREJQ9NTG1 2253 aa8.18□□□□□ -1.1
SCFD1-202ENST00000396629 H3BMH7 237 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 AURKAO14965 403 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 CNOT3O75175 753 aaKnown RBP8.17□□□□□ -1.1
SCFD1-202ENST00000396629 SLC4A1P02730 911 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 MYBL1P10243 752 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 ST6GAL1P15907 406 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 NDUFS1P28331 727 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 HTR1EP28566 365 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 IFI35P80217 286 aaPredicted RBP8.17□□□□□ -1.1
SCFD1-202ENST00000396629 OTUD4Q01804 1114 aaKnown RBP8.17□□□□□ -1.1
SCFD1-202ENST00000396629 UBXN1Q04323 297 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 SLC10A2Q12908 348 aaPredicted RBP8.17□□□□□ -1.1
SCFD1-202ENST00000396629 PRKAA1Q13131 559 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 DPYSL3Q14195 570 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 SLC14A2Q15849 920 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 LDLRAP1Q5SW96 308 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 ZNF324BQ6AW86 544 aaPredicted RBP8.17□□□□□ -1.1
SCFD1-202ENST00000396629 RPUSD3Q6P087 351 aaKnown RBP8.17□□□□□ -1.1
SCFD1-202ENST00000396629 ZNF295-AS1Q8N0V1 137 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 NXPE1Q8N323 547 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 TRIM11Q96F44 468 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 IMP4Q96G21 291 aaKnown RBP8.17□□□□□ -1.1
SCFD1-202ENST00000396629 GBP5Q96PP8 586 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 ZCCHC2Q9C0B9 1178 aaKnown RBP8.17□□□□□ -1.1
SCFD1-202ENST00000396629 BPIFA1Q9NP55 256 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 GPN3Q9UHW5 284 aaPredicted RBP8.17□□□□□ -1.1
SCFD1-202ENST00000396629 ACSL5Q9ULC5 683 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 AGPSO00116 658 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 DDX3XO00571 662 aaKnown RBP eCLIP8.17□□□□□ -1.11e-13■■■■□ 23.8
SCFD1-202ENST00000396629 PCDH17O14917 1159 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 JRKO75564 520 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 UMODP07911 640 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 COX6B1P14854 86 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 HLA-DPA1P20036 260 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 MX2P20592 715 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 PRDX3P30048 256 aaKnown RBP8.17□□□□□ -1.1
SCFD1-202ENST00000396629 LMAN1P49257 510 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 TDGF1P3P51864 188 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 CDC16Q13042 620 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 ZBTB17Q13105 803 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 CYP2A13Q16696 494 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 PRAMEF13Q5VWM6 474 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 RHBDD2Q6NTF9 364 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 MRPL14Q6P1L8 145 aaKnown RBP8.17□□□□□ -1.1
SCFD1-202ENST00000396629 CDHR3Q6ZTQ4 885 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 ZNF571Q7Z3V5 609 aaPredicted RBP8.17□□□□□ -1.1
SCFD1-202ENST00000396629 PARP9Q8IXQ6 854 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 ZNF808Q8N4W9 903 aaPredicted RBP8.17□□□□□ -1.1
SCFD1-202ENST00000396629 BEND7Q8N7W2 519 aaPredicted RBP8.17□□□□□ -1.1
SCFD1-202ENST00000396629 DDHD1Q8NEL9 900 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 OR4E2Q8NGC2 313 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 PROKR1Q8TCW9 393 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 NACC2Q96BF6 587 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 TRIM56Q9BRZ2 755 aaKnown RBP8.17□□□□□ -1.1
SCFD1-202ENST00000396629 ISCUQ9H1K1 167 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 IL26Q9NPH9 171 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 NDOR1Q9UHB4 597 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 SPO11Q9Y5K1 396 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 COLEC10Q9Y6Z7 277 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 TACC2O95359 2948 aa8.17□□□□□ -1.1
SCFD1-202ENST00000396629 CCDC66A2RUB6 948 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 KLHL33A6NCF5 533 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 MGAT4DA6NG13 374 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 LRRC10BA6NIK2 292 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 OR2AG2A6NM03 316 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 MAP3K7O43318 606 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 UGT1A9O60656 530 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 NDST3O95803 873 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 UGT1A6P19224 532 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 UGT1A1P22309 533 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 UGT1A4P22310 534 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 HMGCLP35914 325 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 DCDP81605 110 aaKnown RBP8.16□□□□□ -1.1
SCFD1-202ENST00000396629 GBE1Q04446 702 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 PPIDQ08752 370 aaKnown RBP8.16□□□□□ -1.1
SCFD1-202ENST00000396629 ZFYVE27Q5T4F4 411 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 AGAP7PQ5VUJ5 663 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 ZDHHC20Q5W0Z9 365 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 FAM180AQ6UWF9 173 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 TMEM151BQ8IW70 566 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 BCORP1Q8N888 145 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 OR2L2Q8NH16 312 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 FAF2Q96CS3 445 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 RMDN2Q96LZ7 410 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 AGAP4Q96P64 663 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 ZNF670Q9BS34 389 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 HAUS4Q9H6D7 363 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 UGT1A7Q9HAW7 530 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 UGT1A10Q9HAW8 530 aa8.16□□□□□ -1.1
SCFD1-202ENST00000396629 UGT1A8Q9HAW9 530 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms