RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 UGT3A2Q3SY77 523 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 SLC9B1Q4ZJI4 515 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 HMBOX1Q6NT76 420 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 RETSATQ6NUM9 610 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 ZNF549Q6P9A3 640 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 TMEM26Q6ZUK4 368 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 EFL1Q7Z2Z2 1120 aaKnown RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 SCN4BQ8IWT1 228 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 CMTM8Q8IZV2 173 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 ANKFN1Q8N957 763 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 FAM47BQ8NA70 645 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 TMIEQ8NEW7 156 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 HASPINQ8TF76 798 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 ATP6V1E2Q96A05 226 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 SLCO4A1Q96BD0 722 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 ZNF669Q96BR6 464 aaPredicted RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 MFSD3Q96ES6 412 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 LINC00615Q96LM1 132 aaPredicted RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 FBRSQ9HAH7 460 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 TAS2R13Q9NYV9 303 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 GDE1Q9NZC3 331 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 METRNQ9UJH8 293 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 LSM7Q9UK45 103 aaKnown RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 FAM50BQ9Y247 325 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 ACOT9Q9Y305 439 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 GPSM3Q9Y4H4 160 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 LRRK1Q38SD2 2015 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 NUP205Q92621 2012 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 PCNTO95613 3336 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 A0A096LPK6 155 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 LINC01553A4QN01 128 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 PRR19A6NJB7 356 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 AIM2O14862 343 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 CLPXO76031 633 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 MATN4O95460 622 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 GLUD1P00367 558 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 PGRP06401 933 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 RHOCP08134 193 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 HOXC4P09017 264 aaPredicted RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 STMN1P16949 149 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 HOXB6P17509 224 aaKnown RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 POLR2EP19388 210 aaKnown RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 ENDOUP21128 410 aaKnown RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 LPOP22079 712 aaPredicted RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 TGM1P22735 817 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 RPL10P27635 214 aaKnown RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 MLLT10P55197 1068 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 RHDQ02161 417 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 FCHO2Q0JRZ9 810 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 SQSTM1Q13501 440 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 PPM1LQ5SGD2 360 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 N4BP2L1Q5TBK1 243 aaPredicted RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 AGAP9Q5VTM2 703 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 GPR107Q5VW38 600 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 KANK2Q63ZY3 851 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 BRAT1Q6PJG6 821 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 ISCA2Q86U28 154 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 MMAAQ8IVH4 418 aaKnown RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 CTAGE3PQ8IX95 158 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 NKAPQ8N5F7 415 aaKnown RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 OR52E4Q8NGH9 312 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 LRTOMTQ8WZ04 291 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 MSANTD3Q96H12 275 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 CDKN2AIPNLQ96HQ2 116 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 ZNF347Q96SE7 839 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 ZBED2Q9BTP6 218 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 NAA50Q9GZZ1 169 aaKnown RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 KLHL25Q9H0H3 589 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 MTIF3Q9H2K0 278 aaKnown RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 EPS8L2Q9H6S3 715 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 GPN2Q9H9Y4 310 aaPredicted RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 SYTL2Q9HCH5 934 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 TLR9Q9NR96 1032 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 QPCTLQ9NXS2 382 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 MPP6Q9NZW5 540 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 TMEM216Q9P0N5 145 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 SUCOQ9UBS9 1254 aaKnown RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 TRAF6Q9Y4K3 522 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 PCDHB9Q9Y5E1 797 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 AP1M2Q9Y6Q5 423 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 A0A0J9YYE9 177 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 FAM95CA0A1B0GW59 222 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 TCRBV3S1A0A5B6 114 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 GPR89AB7ZAQ6 455 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 DFFAO00273 331 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 QSOX1O00391 747 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 TRIM38O00635 465 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 SLC22A1O15245 554 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 GRM6O15303 877 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 TRBC1P01850 177 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 GPR89BP0CG08 455 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 ERVK-10P10266 1014 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 BMP2P12643 396 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 CSF2RAP15509 400 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 ZNF182P17025 639 aaPredicted RBP5.27□□□□□ -1.57
VPS41-203ENST00000395969 ZNF37AP17032 561 aaPredicted RBP5.27□□□□□ -1.57
VPS41-203ENST00000395969 IDUAP35475 653 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 ACVRL1P37023 503 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 GRIA3P42263 894 aa5.27□□□□□ -1.57
VPS41-203ENST00000395969 SGSHP51688 502 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms