RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 PTPN2P17706 415 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 GNAZP19086 355 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 SH3PXD2AQ5TCZ1 1133 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 TMEM220Q6QAJ8 160 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 CLEC4CQ8WTT0 213 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 ZNF599Q96NL3 588 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 HBEGFQ99075 208 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 DUS2Q9NX74 493 aaKnown RBP17.1■□□□□ 0.33
UBFD1-201ENST00000395878 ZNF282Q9UDV7 671 aaPredicted RBP17.1■□□□□ 0.33
UBFD1-201ENST00000395878 AJAP1Q9UKB5 411 aaPredicted RBP17.1■□□□□ 0.33
UBFD1-201ENST00000395878 FAM174BQ3ZCQ3 159 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 EGFLAMQ63HQ2 1017 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 MSANTD2Q6P1R3 559 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 RAB43Q86YS6 212 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 OR14C36Q8NHC7 312 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 DNAJB9Q9UBS3 223 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 RWDD3Q9Y3V2 267 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 DPPA5A6NC42 116 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 STXBP1P61764 594 aaKnown RBP17.1■□□□□ 0.33
UBFD1-201ENST00000395878 FAM91A1Q658Y4 838 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 GLTPD2A6NH11 291 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 AREL1O15033 823 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 AIREO43918 545 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 IMPDH1P20839 514 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 GALK1P51570 392 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 HERVK_113P63132 956 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 CYP4F8P98187 520 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 MYBPC3Q14896 1274 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 SNX20Q7Z614 316 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 LAPTM4BQ86VI4 370 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 RANBP3LQ86VV4 465 aaPredicted RBP17.1■□□□□ 0.33
UBFD1-201ENST00000395878 C11orf24Q96F05 449 aaPredicted RBP17.1■□□□□ 0.33
UBFD1-201ENST00000395878 ERVK-6Q9BXR3 956 aa17.1■□□□□ 0.33
UBFD1-201ENST00000395878 ERVK-8P63133 956 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 ILF3Q12906 894 aaKnown RBP eCLIP17.09■□□□□ 0.331e-9■■■■□ 24.3
UBFD1-201ENST00000395878 CLEC20AQ6ZU45 233 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 SAMD14Q8IZD0 417 aaPredicted RBP17.09■□□□□ 0.33
UBFD1-201ENST00000395878 ZNF516Q92618 1163 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 OXSMQ9NWU1 459 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 PEX16Q9Y5Y5 336 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 K7EPI3 171 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 CCNFP41002 786 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 HCAR3P49019 387 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 AQP4P55087 323 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 UBXN11Q5T124 520 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 ATCAYQ86WG3 371 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 CADM2Q8N3J6 435 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 HTRA1Q92743 480 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 C8orf48Q96LL4 319 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 KLHL32Q96NJ5 620 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 ZNF347Q96SE7 839 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 TESMINQ9Y4I5 508 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 NFAT5O94916 1531 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 SLIT2O94813 1529 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 NME6O75414 186 aaPredicted RBP17.09■□□□□ 0.33
UBFD1-201ENST00000395878 LGR5O75473 907 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 PCDH1Q08174 1060 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 FBXO42Q6P3S6 717 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 SLAIN1Q8ND83 568 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 FBXO22Q8NEZ5 403 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 MYO5BQ9ULV0 1848 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 IQCMA0A1B0GVH7 501 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 hCG_2039718K7EN88 272 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 PI15O43692 258 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 PEX10O60683 326 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 WASP42768 502 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 SLC18A1P54219 525 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 WDR4P57081 412 aaKnown RBP17.09■□□□□ 0.33
UBFD1-201ENST00000395878 GAD2Q05329 585 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 HSPB3Q12988 150 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 OR5K1Q8NHB7 308 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 SNX33Q8WV41 574 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 LCN9Q8WX39 176 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 CHCHD6Q9BRQ6 235 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 CIDEBQ9UHD4 219 aa17.09■□□□□ 0.33
UBFD1-201ENST00000395878 AQP12BA6NM10 295 aa17.08■□□□□ 0.33
UBFD1-201ENST00000395878 MATN4O95460 622 aa17.08■□□□□ 0.33
UBFD1-201ENST00000395878 RLN1P04808 185 aa17.08■□□□□ 0.33
UBFD1-201ENST00000395878 FAM163BP0C2L3 166 aa17.08■□□□□ 0.33
UBFD1-201ENST00000395878 SMCO1Q147U7 214 aa17.08■□□□□ 0.33
UBFD1-201ENST00000395878 GPR33Q49SQ1 333 aa17.08■□□□□ 0.33
UBFD1-201ENST00000395878 AQP12AQ8IXF9 295 aa17.08■□□□□ 0.33
UBFD1-201ENST00000395878 FAM156AQ8NDB6 213 aa17.08■□□□□ 0.33
UBFD1-201ENST00000395878 GPATCH1Q9BRR8 931 aaKnown RBP17.08■□□□□ 0.33
UBFD1-201ENST00000395878 OSBPL2Q9H1P3 480 aa17.08■□□□□ 0.33
UBFD1-201ENST00000395878 FNIP2Q9P278 1114 aa17.08■□□□□ 0.33
UBFD1-201ENST00000395878 WRAP73Q9P2S5 460 aaPredicted RBP17.08■□□□□ 0.33
UBFD1-201ENST00000395878 ZNF280AP59817 542 aaPredicted RBP17.08■□□□□ 0.32
UBFD1-201ENST00000395878 TIGD5Q53EQ6 642 aa17.08■□□□□ 0.32
UBFD1-201ENST00000395878 ATXN7L2Q5T6C5 722 aaPredicted RBP17.08■□□□□ 0.32
UBFD1-201ENST00000395878 OLFML2AQ68BL7 652 aa17.08■□□□□ 0.32
UBFD1-201ENST00000395878 CXorf57Q6NSI4 855 aaKnown RBP17.08■□□□□ 0.32
UBFD1-201ENST00000395878 CYP2U1Q7Z449 544 aa17.08■□□□□ 0.32
UBFD1-201ENST00000395878 SLC30A8Q8IWU4 369 aa17.08■□□□□ 0.32
UBFD1-201ENST00000395878 PRICKLE1Q96MT3 831 aaPredicted RBP17.08■□□□□ 0.32
UBFD1-201ENST00000395878 SEZ6LQ9BYH1 1024 aa17.08■□□□□ 0.32
UBFD1-201ENST00000395878 COQ10BQ9H8M1 238 aa17.08■□□□□ 0.32
UBFD1-201ENST00000395878 ABCB9Q9NP78 766 aa17.08■□□□□ 0.32
UBFD1-201ENST00000395878 ZDHHC4Q9NPG8 344 aa17.08■□□□□ 0.32
UBFD1-201ENST00000395878 OSER1Q9NX31 292 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms